Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Tnfsf4P43488 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Tnfsf4P43488 Gm43121-201ENSMUST00000199065 1305 ntBASIC4.9□□□□□ -1.63
Tnfsf4P43488 Gm38243-201ENSMUST00000194737 1567 ntBASIC4.9□□□□□ -1.63
Tnfsf4P43488 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Tnfsf4P43488 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Tnfsf4P43488 Gm37488-201ENSMUST00000195434 3374 ntBASIC4.89□□□□□ -1.63
Tnfsf4P43488 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC4.89□□□□□ -1.63
Tnfsf4P43488 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Tnfsf4P43488 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Tnfsf4P43488 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Tnfsf4P43488 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Tnfsf4P43488 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Tnfsf4P43488 Mir879-201ENSMUST00000104703 76 ntBASIC4.89□□□□□ -1.63
Tnfsf4P43488 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
Tnfsf4P43488 Gm12820-201ENSMUST00000119233 342 ntBASIC4.89□□□□□ -1.63
Tnfsf4P43488 Gm16016-201ENSMUST00000120831 550 ntBASIC4.89□□□□□ -1.63
Tnfsf4P43488 Gm11677-201ENSMUST00000121349 977 ntBASIC4.89□□□□□ -1.63
Tnfsf4P43488 Gm12332-201ENSMUST00000121397 922 ntBASIC4.89□□□□□ -1.63
Tnfsf4P43488 Gm12936-201ENSMUST00000121439 301 ntBASIC4.89□□□□□ -1.63
Tnfsf4P43488 Gm13162-201ENSMUST00000121481 454 ntBASIC4.89□□□□□ -1.63
Tnfsf4P43488 n-R5s174-201ENSMUST00000122638 121 ntBASIC4.89□□□□□ -1.63
Tnfsf4P43488 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC4.89□□□□□ -1.63
Tnfsf4P43488 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Tnfsf4P43488 Gm26490-201ENSMUST00000157879 140 ntBASIC4.89□□□□□ -1.63
Tnfsf4P43488 Gm24940-201ENSMUST00000158326 108 ntBASIC4.89□□□□□ -1.63
Tnfsf4P43488 Gm6808-201ENSMUST00000162341 807 ntBASIC4.89□□□□□ -1.63
Tnfsf4P43488 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC4.89□□□□□ -1.63
Tnfsf4P43488 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC4.89□□□□□ -1.63
Tnfsf4P43488 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Tnfsf4P43488 Gm18828-202ENSMUST00000181035 310 ntBASIC4.89□□□□□ -1.63
Tnfsf4P43488 Gm27541-201ENSMUST00000184078 122 ntBASIC4.89□□□□□ -1.63
Tnfsf4P43488 Mir7087-201ENSMUST00000184840 70 ntBASIC4.89□□□□□ -1.63
Tnfsf4P43488 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC4.89□□□□□ -1.63
Tnfsf4P43488 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC4.89□□□□□ -1.63
Tnfsf4P43488 Gm42694-201ENSMUST00000196951 358 ntBASIC4.89□□□□□ -1.63
Tnfsf4P43488 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC4.89□□□□□ -1.63
Tnfsf4P43488 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC4.89□□□□□ -1.63
Tnfsf4P43488 Gm44091-201ENSMUST00000205212 649 ntBASIC4.89□□□□□ -1.63
Tnfsf4P43488 Gm45215-201ENSMUST00000206407 395 ntBASIC4.89□□□□□ -1.63
Tnfsf4P43488 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Tnfsf4P43488 Gm18705-201ENSMUST00000215985 913 ntBASIC4.89□□□□□ -1.63
Tnfsf4P43488 Gm6906-201ENSMUST00000218014 569 ntBASIC4.89□□□□□ -1.63
Tnfsf4P43488 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Tnfsf4P43488 CT030182.2-201ENSMUST00000223569 620 ntBASIC4.89□□□□□ -1.63
Tnfsf4P43488 AC165953.1-201ENSMUST00000226386 357 ntBASIC4.89□□□□□ -1.63
Tnfsf4P43488 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Tnfsf4P43488 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Tnfsf4P43488 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Tnfsf4P43488 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC4.89□□□□□ -1.63
Tnfsf4P43488 Gm44439-201ENSMUST00000203379 3592 ntBASIC4.89□□□□□ -1.63
Tnfsf4P43488 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC4.89□□□□□ -1.63
Tnfsf4P43488 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Tnfsf4P43488 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Tnfsf4P43488 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Tnfsf4P43488 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Tnfsf4P43488 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC4.88□□□□□ -1.63
Tnfsf4P43488 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Tnfsf4P43488 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Tnfsf4P43488 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm22468-201ENSMUST00000116680 120 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm26248-201ENSMUST00000116700 121 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm26137-201ENSMUST00000116701 121 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm26190-201ENSMUST00000116704 121 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm24617-201ENSMUST00000116705 121 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm25778-201ENSMUST00000116713 121 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm25774-201ENSMUST00000116717 121 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm22102-201ENSMUST00000116730 121 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm23177-201ENSMUST00000116784 121 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm24193-201ENSMUST00000116801 121 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm24744-201ENSMUST00000116833 121 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm24427-201ENSMUST00000116896 121 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm22346-201ENSMUST00000116918 121 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm23606-201ENSMUST00000116938 121 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm22029-201ENSMUST00000116940 121 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm26298-201ENSMUST00000116956 121 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm23844-201ENSMUST00000116959 121 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm24484-201ENSMUST00000117009 121 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm25347-201ENSMUST00000117026 121 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm22112-201ENSMUST00000117032 121 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm14790-201ENSMUST00000117760 1293 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm15715-201ENSMUST00000118032 283 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm12704-201ENSMUST00000119789 464 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
Tnfsf4P43488 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm23993-201ENSMUST00000157478 144 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm24719-201ENSMUST00000157520 110 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm22991-201ENSMUST00000178126 121 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm25754-201ENSMUST00000178653 121 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm22419-201ENSMUST00000178780 121 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm24802-201ENSMUST00000178897 121 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm25208-201ENSMUST00000178964 121 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm24567-201ENSMUST00000179294 121 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms