Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx2P43241 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC5.07□□□□□ -1.6
Cdx2P43241 Gm26153-201ENSMUST00000157433 127 ntBASIC5.07□□□□□ -1.6
Cdx2P43241 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
Cdx2P43241 Gm8941-201ENSMUST00000181451 899 ntBASIC5.07□□□□□ -1.6
Cdx2P43241 Mir6926-201ENSMUST00000184562 68 ntBASIC5.07□□□□□ -1.6
Cdx2P43241 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC5.07□□□□□ -1.6
Cdx2P43241 Gm5734-201ENSMUST00000189787 913 ntBASIC5.07□□□□□ -1.6
Cdx2P43241 Gm2367-201ENSMUST00000192374 472 ntBASIC5.07□□□□□ -1.6
Cdx2P43241 Gm42720-201ENSMUST00000196813 300 ntBASIC5.07□□□□□ -1.6
Cdx2P43241 CT954323.2-201ENSMUST00000222056 213 ntBASIC5.07□□□□□ -1.6
Cdx2P43241 Ap3m1-208ENSMUST00000224016 764 ntBASIC5.07□□□□□ -1.6
Cdx2P43241 AC125405.1-201ENSMUST00000226406 589 ntBASIC5.07□□□□□ -1.6
Cdx2P43241 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.07□□□□□ -1.6
Cdx2P43241 Gm23796-201ENSMUST00000084011 160 ntBASIC5.07□□□□□ -1.6
Cdx2P43241 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx2P43241 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Cdx2P43241 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Cdx2P43241 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx2P43241 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Cdx2P43241 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx2P43241 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx2P43241 Gm43771-201ENSMUST00000202931 1578 ntBASIC5.07□□□□□ -1.6
Cdx2P43241 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC5.07□□□□□ -1.6
Cdx2P43241 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx2P43241 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.07□□□□□ -1.6
Cdx2P43241 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.07□□□□□ -1.6
Cdx2P43241 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.07□□□□□ -1.6
Cdx2P43241 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdx2P43241 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx2P43241 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.06□□□□□ -1.6
Cdx2P43241 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx2P43241 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.06□□□□□ -1.6
Cdx2P43241 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Cdx2P43241 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.06□□□□□ -1.6
Cdx2P43241 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Cdx2P43241 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
Cdx2P43241 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx2P43241 Gm14563-201ENSMUST00000120571 354 ntBASIC5.06□□□□□ -1.6
Cdx2P43241 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.06□□□□□ -1.6
Cdx2P43241 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx2P43241 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx2P43241 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx2P43241 Gm5699-201ENSMUST00000152491 723 ntBASIC5.06□□□□□ -1.6
Cdx2P43241 Gm22277-201ENSMUST00000157204 277 ntBASIC5.06□□□□□ -1.6
Cdx2P43241 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.06□□□□□ -1.6
Cdx2P43241 Gm8214-201ENSMUST00000172123 351 ntBASIC5.06□□□□□ -1.6
Cdx2P43241 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx2P43241 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx2P43241 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx2P43241 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx2P43241 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx2P43241 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx2P43241 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx2P43241 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx2P43241 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx2P43241 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx2P43241 Gm9320-201ENSMUST00000184151 473 ntBASIC5.06□□□□□ -1.6
Cdx2P43241 Gm9687-201ENSMUST00000189312 602 ntBASIC5.06□□□□□ -1.6
Cdx2P43241 Gm5511-201ENSMUST00000189380 802 ntBASIC5.06□□□□□ -1.6
Cdx2P43241 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.06□□□□□ -1.6
Cdx2P43241 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC5.06□□□□□ -1.6
Cdx2P43241 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx2P43241 Gm7721-201ENSMUST00000200446 546 ntBASIC5.06□□□□□ -1.6
Cdx2P43241 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx2P43241 Gm29785-201ENSMUST00000217033 383 ntBASIC5.06□□□□□ -1.6
Cdx2P43241 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC5.06□□□□□ -1.6
Cdx2P43241 AC124732.4-201ENSMUST00000220930 1274 ntBASIC5.06□□□□□ -1.6
Cdx2P43241 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC5.06□□□□□ -1.6
Cdx2P43241 Gm19786-201ENSMUST00000222589 580 ntBASIC5.06□□□□□ -1.6
Cdx2P43241 AC125543.1-201ENSMUST00000222778 101 ntBASIC5.06□□□□□ -1.6
Cdx2P43241 AC131117.2-203ENSMUST00000225886 950 ntBASIC5.06□□□□□ -1.6
Cdx2P43241 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Cdx2P43241 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Cdx2P43241 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx2P43241 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Cdx2P43241 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Cdx2P43241 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx2P43241 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Cdx2P43241 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx2P43241 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Cdx2P43241 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Cdx2P43241 Fam35a-206ENSMUST00000228626 3100 ntBASIC5.06□□□□□ -1.6
Cdx2P43241 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx2P43241 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx2P43241 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx2P43241 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx2P43241 Gm38189-201ENSMUST00000194495 1457 ntBASIC5.06□□□□□ -1.6
Cdx2P43241 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Cdx2P43241 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.05□□□□□ -1.6
Cdx2P43241 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx2P43241 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.05□□□□□ -1.6
Cdx2P43241 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.05□□□□□ -1.6
Cdx2P43241 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx2P43241 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
Cdx2P43241 AC164092.3-201ENSMUST00000216970 1323 ntBASIC5.05□□□□□ -1.6
Cdx2P43241 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Cdx2P43241 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx2P43241 Gm25537-201ENSMUST00000103851 109 ntBASIC5.05□□□□□ -1.6
Cdx2P43241 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms