Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Traf1P39428 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Traf1P39428 Gm42702-201ENSMUST00000199515 4217 ntBASIC6.33□□□□□ -1.4
Traf1P39428 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Traf1P39428 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
Traf1P39428 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Traf1P39428 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Traf1P39428 Gm42725-201ENSMUST00000199296 4193 ntBASIC6.32□□□□□ -1.4
Traf1P39428 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
Traf1P39428 Gm15189-201ENSMUST00000121164 1966 ntBASIC6.32□□□□□ -1.4
Traf1P39428 Mir546-201ENSMUST00000102105 121 ntBASIC6.32□□□□□ -1.4
Traf1P39428 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Traf1P39428 Gm15803-201ENSMUST00000120118 394 ntBASIC6.32□□□□□ -1.4
Traf1P39428 Gm12288-201ENSMUST00000121054 1282 ntBASIC6.32□□□□□ -1.4
Traf1P39428 Gm14732-201ENSMUST00000121372 545 ntBASIC6.32□□□□□ -1.4
Traf1P39428 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC6.32□□□□□ -1.4
Traf1P39428 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Traf1P39428 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC6.32□□□□□ -1.4
Traf1P39428 Gm22895-201ENSMUST00000157508 308 ntBASIC6.32□□□□□ -1.4
Traf1P39428 Gm22116-201ENSMUST00000158791 141 ntBASIC6.32□□□□□ -1.4
Traf1P39428 Gm4831-201ENSMUST00000174626 594 ntBASIC6.32□□□□□ -1.4
Traf1P39428 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC6.32□□□□□ -1.4
Traf1P39428 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Traf1P39428 Gm8669-201ENSMUST00000183839 945 ntBASIC6.32□□□□□ -1.4
Traf1P39428 Gm27541-201ENSMUST00000184078 122 ntBASIC6.32□□□□□ -1.4
Traf1P39428 Gm29474-201ENSMUST00000187688 379 ntBASIC6.32□□□□□ -1.4
Traf1P39428 Gm37173-201ENSMUST00000194498 1017 ntBASIC6.32□□□□□ -1.4
Traf1P39428 Gm37215-201ENSMUST00000194927 1259 ntBASIC6.32□□□□□ -1.4
Traf1P39428 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Traf1P39428 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC6.32□□□□□ -1.4
Traf1P39428 Gm18007-201ENSMUST00000205019 844 ntBASIC6.32□□□□□ -1.4
Traf1P39428 CT025665.1-201ENSMUST00000215251 1199 ntBASIC6.32□□□□□ -1.4
Traf1P39428 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC6.32□□□□□ -1.4
Traf1P39428 Gm18904-201ENSMUST00000218756 329 ntBASIC6.32□□□□□ -1.4
Traf1P39428 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC6.32□□□□□ -1.4
Traf1P39428 AL807824.1-201ENSMUST00000223151 183 ntBASIC6.32□□□□□ -1.4
Traf1P39428 CT025552.1-201ENSMUST00000224561 521 ntBASIC6.32□□□□□ -1.4
Traf1P39428 AC161383.1-201ENSMUST00000227356 527 ntBASIC6.32□□□□□ -1.4
Traf1P39428 AC131100.2-201ENSMUST00000227701 998 ntBASIC6.32□□□□□ -1.4
Traf1P39428 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Traf1P39428 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Traf1P39428 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Traf1P39428 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC6.32□□□□□ -1.4
Traf1P39428 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Traf1P39428 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Traf1P39428 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
Traf1P39428 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Traf1P39428 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Traf1P39428 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Traf1P39428 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Traf1P39428 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Traf1P39428 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Traf1P39428 Gm42540-201ENSMUST00000200319 2008 ntBASIC6.32□□□□□ -1.4
Traf1P39428 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Traf1P39428 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC6.31□□□□□ -1.4
Traf1P39428 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Traf1P39428 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Traf1P39428 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Traf1P39428 Gm5139-201ENSMUST00000175943 249 ntBASIC6.31□□□□□ -1.4
Traf1P39428 Gm6223-201ENSMUST00000178436 871 ntBASIC6.31□□□□□ -1.4
Traf1P39428 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Traf1P39428 Gm8581-201ENSMUST00000188636 890 ntBASIC6.31□□□□□ -1.4
Traf1P39428 Gm18529-201ENSMUST00000193025 1257 ntBASIC6.31□□□□□ -1.4
Traf1P39428 Gm37436-201ENSMUST00000193842 1085 ntBASIC6.31□□□□□ -1.4
Traf1P39428 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC6.31□□□□□ -1.4
Traf1P39428 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Traf1P39428 Gm20940-201ENSMUST00000197308 360 ntBASIC6.31□□□□□ -1.4
Traf1P39428 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC6.31□□□□□ -1.4
Traf1P39428 Gm20997-201ENSMUST00000205148 231 ntBASIC6.31□□□□□ -1.4
Traf1P39428 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC6.31□□□□□ -1.4
Traf1P39428 Gm18255-201ENSMUST00000211316 765 ntBASIC6.31□□□□□ -1.4
Traf1P39428 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC6.31□□□□□ -1.4
Traf1P39428 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC6.31□□□□□ -1.4
Traf1P39428 Gm18899-201ENSMUST00000217663 546 ntBASIC6.31□□□□□ -1.4
Traf1P39428 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Traf1P39428 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Traf1P39428 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Traf1P39428 n-R5s205-201ENSMUST00000083149 125 ntBASIC6.31□□□□□ -1.4
Traf1P39428 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Traf1P39428 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Traf1P39428 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Traf1P39428 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Traf1P39428 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Traf1P39428 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Traf1P39428 CT009733.2-202ENSMUST00000224171 4748 ntBASIC6.3□□□□□ -1.4
Traf1P39428 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC6.3□□□□□ -1.4
Traf1P39428 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC6.3□□□□□ -1.4
Traf1P39428 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Traf1P39428 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Traf1P39428 Gm11970-201ENSMUST00000116105 320 ntBASIC6.3□□□□□ -1.4
Traf1P39428 Gm11212-201ENSMUST00000118337 618 ntBASIC6.3□□□□□ -1.4
Traf1P39428 Gm12401-201ENSMUST00000118435 228 ntBASIC6.3□□□□□ -1.4
Traf1P39428 Gm13532-201ENSMUST00000120373 240 ntBASIC6.3□□□□□ -1.4
Traf1P39428 Gm14620-201ENSMUST00000120656 383 ntBASIC6.3□□□□□ -1.4
Traf1P39428 Gm14369-201ENSMUST00000121355 285 ntBASIC6.3□□□□□ -1.4
Traf1P39428 Gm6027-201ENSMUST00000121467 756 ntBASIC6.3□□□□□ -1.4
Traf1P39428 Gm11679-201ENSMUST00000121830 779 ntBASIC6.3□□□□□ -1.4
Traf1P39428 Gm13738-201ENSMUST00000122437 469 ntBASIC6.3□□□□□ -1.4
Traf1P39428 Gm23883-201ENSMUST00000122686 290 ntBASIC6.3□□□□□ -1.4
Traf1P39428 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms