Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm38081-201ENSMUST00000192680 1645 ntBASIC4.33□□□□□ -1.72
Col8a2P25318 Gm7416-201ENSMUST00000117448 1487 ntBASIC4.33□□□□□ -1.72
Col8a2P25318 Gm29084-201ENSMUST00000185587 1452 ntBASIC4.33□□□□□ -1.72
Col8a2P25318 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Col8a2P25318 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Col8a2P25318 Gm22273-201ENSMUST00000104040 132 ntBASIC4.33□□□□□ -1.72
Col8a2P25318 Gm23274-201ENSMUST00000104056 130 ntBASIC4.33□□□□□ -1.72
Col8a2P25318 Gm15357-201ENSMUST00000119160 285 ntBASIC4.33□□□□□ -1.72
Col8a2P25318 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC4.33□□□□□ -1.72
Col8a2P25318 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC4.33□□□□□ -1.72
Col8a2P25318 Gm5383-201ENSMUST00000121177 617 ntBASIC4.33□□□□□ -1.72
Col8a2P25318 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Col8a2P25318 Gm25389-201ENSMUST00000157340 286 ntBASIC4.33□□□□□ -1.72
Col8a2P25318 Gm3053-201ENSMUST00000161709 616 ntBASIC4.33□□□□□ -1.72
Col8a2P25318 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col8a2P25318 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC4.33□□□□□ -1.72
Col8a2P25318 Gm26318-201ENSMUST00000176507 96 ntBASIC4.33□□□□□ -1.72
Col8a2P25318 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Col8a2P25318 Gm26925-201ENSMUST00000182470 957 ntBASIC4.33□□□□□ -1.72
Col8a2P25318 Mir6986-201ENSMUST00000184483 58 ntBASIC4.33□□□□□ -1.72
Col8a2P25318 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col8a2P25318 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Col8a2P25318 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Col8a2P25318 Gm2623-201ENSMUST00000199229 286 ntBASIC4.33□□□□□ -1.72
Col8a2P25318 Gm45731-201ENSMUST00000211988 1203 ntBASIC4.33□□□□□ -1.72
Col8a2P25318 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC4.33□□□□□ -1.72
Col8a2P25318 CT009754.4-201ENSMUST00000221430 565 ntBASIC4.33□□□□□ -1.72
Col8a2P25318 AC161252.2-201ENSMUST00000224978 374 ntBASIC4.33□□□□□ -1.72
Col8a2P25318 AC141425.1-201ENSMUST00000224989 265 ntBASIC4.33□□□□□ -1.72
Col8a2P25318 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC4.33□□□□□ -1.72
Col8a2P25318 Mir31-201ENSMUST00000083474 106 ntBASIC4.33□□□□□ -1.72
Col8a2P25318 Gm37212-201ENSMUST00000192582 3650 ntBASIC4.33□□□□□ -1.72
Col8a2P25318 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col8a2P25318 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC4.33□□□□□ -1.72
Col8a2P25318 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col8a2P25318 AC152944.1-201ENSMUST00000220160 3101 ntBASIC4.33□□□□□ -1.72
Col8a2P25318 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Col8a2P25318 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col8a2P25318 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Col8a2P25318 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC4.33□□□□□ -1.72
Col8a2P25318 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col8a2P25318 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col8a2P25318 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Col8a2P25318 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Col8a2P25318 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC4.32□□□□□ -1.72
Col8a2P25318 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col8a2P25318 Gm44248-201ENSMUST00000203079 1549 ntBASIC4.32□□□□□ -1.72
Col8a2P25318 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col8a2P25318 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC4.32□□□□□ -1.72
Col8a2P25318 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col8a2P25318 Gm37541-201ENSMUST00000192464 2315 ntBASIC4.32□□□□□ -1.72
Col8a2P25318 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC4.32□□□□□ -1.72
Col8a2P25318 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col8a2P25318 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Col8a2P25318 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
Col8a2P25318 Gm22194-201ENSMUST00000116869 95 ntBASIC4.32□□□□□ -1.72
Col8a2P25318 Gm15048-201ENSMUST00000118201 954 ntBASIC4.32□□□□□ -1.72
Col8a2P25318 Gm13452-201ENSMUST00000120896 1097 ntBASIC4.32□□□□□ -1.72
Col8a2P25318 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC4.32□□□□□ -1.72
Col8a2P25318 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Col8a2P25318 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC4.32□□□□□ -1.72
Col8a2P25318 Gm22804-201ENSMUST00000158052 101 ntBASIC4.32□□□□□ -1.72
Col8a2P25318 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Col8a2P25318 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Col8a2P25318 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Col8a2P25318 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC4.32□□□□□ -1.72
Col8a2P25318 Gm10784-201ENSMUST00000178715 238 ntBASIC4.32□□□□□ -1.72
Col8a2P25318 Gm27037-201ENSMUST00000182270 960 ntBASIC4.32□□□□□ -1.72
Col8a2P25318 Mir6412-201ENSMUST00000184477 97 ntBASIC4.32□□□□□ -1.72
Col8a2P25318 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC4.32□□□□□ -1.72
Col8a2P25318 Gm18036-201ENSMUST00000195256 272 ntBASIC4.32□□□□□ -1.72
Col8a2P25318 Gm44330-201ENSMUST00000200106 143 ntBASIC4.32□□□□□ -1.72
Col8a2P25318 Gm44776-201ENSMUST00000207212 381 ntBASIC4.32□□□□□ -1.72
Col8a2P25318 AC152979.3-201ENSMUST00000217720 479 ntBASIC4.32□□□□□ -1.72
Col8a2P25318 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
Col8a2P25318 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC4.32□□□□□ -1.72
Col8a2P25318 Gm32526-201ENSMUST00000221878 981 ntBASIC4.32□□□□□ -1.72
Col8a2P25318 CT030184.2-201ENSMUST00000223064 263 ntBASIC4.32□□□□□ -1.72
Col8a2P25318 AC165953.1-201ENSMUST00000226386 357 ntBASIC4.32□□□□□ -1.72
Col8a2P25318 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col8a2P25318 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Col8a2P25318 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Col8a2P25318 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Col8a2P25318 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Col8a2P25318 Mir30b-201ENSMUST00000083542 96 ntBASIC4.32□□□□□ -1.72
Col8a2P25318 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC4.32□□□□□ -1.72
Col8a2P25318 Gm42503-201ENSMUST00000199080 3706 ntBASIC4.32□□□□□ -1.72
Col8a2P25318 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC4.32□□□□□ -1.72
Col8a2P25318 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC4.32□□□□□ -1.72
Col8a2P25318 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Col8a2P25318 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col8a2P25318 AC112142.1-203ENSMUST00000228670 2472 ntBASIC4.32□□□□□ -1.72
Col8a2P25318 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col8a2P25318 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC4.32□□□□□ -1.72
Col8a2P25318 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col8a2P25318 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col8a2P25318 AC158981.2-201ENSMUST00000227565 1537 ntBASIC4.31□□□□□ -1.72
Col8a2P25318 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col8a2P25318 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col8a2P25318 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms