Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Sdc1P18828 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Sdc1P18828 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC4.25□□□□□ -1.73
Sdc1P18828 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Sdc1P18828 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC4.25□□□□□ -1.73
Sdc1P18828 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Sdc1P18828 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Sdc1P18828 AC122382.2-201ENSMUST00000225128 3602 ntBASIC4.25□□□□□ -1.73
Sdc1P18828 Gm44439-201ENSMUST00000203379 3592 ntBASIC4.25□□□□□ -1.73
Sdc1P18828 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC4.25□□□□□ -1.73
Sdc1P18828 Gm11256-201ENSMUST00000118109 829 ntBASIC4.25□□□□□ -1.73
Sdc1P18828 Gm11624-201ENSMUST00000118579 1041 ntBASIC4.25□□□□□ -1.73
Sdc1P18828 Gm6446-201ENSMUST00000120604 818 ntBASIC4.25□□□□□ -1.73
Sdc1P18828 Gm15166-201ENSMUST00000120790 385 ntBASIC4.25□□□□□ -1.73
Sdc1P18828 Gm6977-201ENSMUST00000121568 512 ntBASIC4.25□□□□□ -1.73
Sdc1P18828 Gm15618-201ENSMUST00000121610 452 ntBASIC4.25□□□□□ -1.73
Sdc1P18828 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC4.25□□□□□ -1.73
Sdc1P18828 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC4.25□□□□□ -1.73
Sdc1P18828 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Sdc1P18828 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Sdc1P18828 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC4.25□□□□□ -1.73
Sdc1P18828 Gm5699-201ENSMUST00000152491 723 ntBASIC4.25□□□□□ -1.73
Sdc1P18828 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Sdc1P18828 Gm25013-201ENSMUST00000158402 128 ntBASIC4.25□□□□□ -1.73
Sdc1P18828 Gm25714-201ENSMUST00000158626 296 ntBASIC4.25□□□□□ -1.73
Sdc1P18828 Gm8715-201ENSMUST00000162728 531 ntBASIC4.25□□□□□ -1.73
Sdc1P18828 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC4.25□□□□□ -1.73
Sdc1P18828 Gm24812-201ENSMUST00000175315 284 ntBASIC4.25□□□□□ -1.73
Sdc1P18828 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC4.25□□□□□ -1.73
Sdc1P18828 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC4.25□□□□□ -1.73
Sdc1P18828 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Sdc1P18828 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Sdc1P18828 Mir7011-201ENSMUST00000183768 73 ntBASIC4.25□□□□□ -1.73
Sdc1P18828 Gm6075-201ENSMUST00000186816 486 ntBASIC4.25□□□□□ -1.73
Sdc1P18828 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC4.25□□□□□ -1.73
Sdc1P18828 Gm29475-201ENSMUST00000190767 312 ntBASIC4.25□□□□□ -1.73
Sdc1P18828 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.25□□□□□ -1.73
Sdc1P18828 Gm18843-201ENSMUST00000194982 719 ntBASIC4.25□□□□□ -1.73
Sdc1P18828 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Sdc1P18828 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC4.25□□□□□ -1.73
Sdc1P18828 Gm44227-201ENSMUST00000203576 241 ntBASIC4.25□□□□□ -1.73
Sdc1P18828 Gm4574-201ENSMUST00000207804 542 ntBASIC4.25□□□□□ -1.73
Sdc1P18828 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC4.25□□□□□ -1.73
Sdc1P18828 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC4.25□□□□□ -1.73
Sdc1P18828 Gm5750-201ENSMUST00000218711 801 ntBASIC4.25□□□□□ -1.73
Sdc1P18828 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC4.25□□□□□ -1.73
Sdc1P18828 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC4.25□□□□□ -1.73
Sdc1P18828 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Sdc1P18828 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Sdc1P18828 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Sdc1P18828 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Sdc1P18828 Gm37767-201ENSMUST00000193239 1834 ntBASIC4.25□□□□□ -1.73
Sdc1P18828 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Sdc1P18828 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.25□□□□□ -1.73
Sdc1P18828 Gm18422-202ENSMUST00000203798 2214 ntBASIC4.25□□□□□ -1.73
Sdc1P18828 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Sdc1P18828 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Sdc1P18828 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Sdc1P18828 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Sdc1P18828 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Sdc1P18828 AC124556.1-201ENSMUST00000218256 1319 ntBASIC4.24□□□□□ -1.73
Sdc1P18828 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Sdc1P18828 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Sdc1P18828 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Sdc1P18828 Gm37569-201ENSMUST00000192111 1722 ntBASIC4.24□□□□□ -1.73
Sdc1P18828 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Sdc1P18828 Gm42729-201ENSMUST00000201770 2930 ntBASIC4.24□□□□□ -1.73
Sdc1P18828 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
Sdc1P18828 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Sdc1P18828 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC4.24□□□□□ -1.73
Sdc1P18828 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Sdc1P18828 Gm26340-201ENSMUST00000102365 99 ntBASIC4.24□□□□□ -1.73
Sdc1P18828 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC4.24□□□□□ -1.73
Sdc1P18828 Gm14516-201ENSMUST00000120012 252 ntBASIC4.24□□□□□ -1.73
Sdc1P18828 Gm11255-201ENSMUST00000120448 1180 ntBASIC4.24□□□□□ -1.73
Sdc1P18828 Gm8317-201ENSMUST00000121261 471 ntBASIC4.24□□□□□ -1.73
Sdc1P18828 n-R5s98-201ENSMUST00000122549 119 ntBASIC4.24□□□□□ -1.73
Sdc1P18828 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Sdc1P18828 Gm22492-201ENSMUST00000157192 297 ntBASIC4.24□□□□□ -1.73
Sdc1P18828 Gm22226-201ENSMUST00000157355 109 ntBASIC4.24□□□□□ -1.73
Sdc1P18828 Gm23116-201ENSMUST00000158481 67 ntBASIC4.24□□□□□ -1.73
Sdc1P18828 Gm26404-201ENSMUST00000158498 109 ntBASIC4.24□□□□□ -1.73
Sdc1P18828 Gm23027-201ENSMUST00000158771 158 ntBASIC4.24□□□□□ -1.73
Sdc1P18828 Gm25348-201ENSMUST00000158961 111 ntBASIC4.24□□□□□ -1.73
Sdc1P18828 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Sdc1P18828 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC4.24□□□□□ -1.73
Sdc1P18828 Gm6489-201ENSMUST00000178167 696 ntBASIC4.24□□□□□ -1.73
Sdc1P18828 Gm21839-201ENSMUST00000179536 378 ntBASIC4.24□□□□□ -1.73
Sdc1P18828 Mir8114-201ENSMUST00000183582 111 ntBASIC4.24□□□□□ -1.73
Sdc1P18828 Gm9443-201ENSMUST00000188406 816 ntBASIC4.24□□□□□ -1.73
Sdc1P18828 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC4.24□□□□□ -1.73
Sdc1P18828 Gm28586-201ENSMUST00000189857 456 ntBASIC4.24□□□□□ -1.73
Sdc1P18828 Gm38170-201ENSMUST00000195404 816 ntBASIC4.24□□□□□ -1.73
Sdc1P18828 Gm6543-201ENSMUST00000197353 808 ntBASIC4.24□□□□□ -1.73
Sdc1P18828 Gm43396-201ENSMUST00000197506 706 ntBASIC4.24□□□□□ -1.73
Sdc1P18828 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC4.24□□□□□ -1.73
Sdc1P18828 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Sdc1P18828 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC4.24□□□□□ -1.73
Sdc1P18828 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Sdc1P18828 Gm6068-201ENSMUST00000222270 387 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms