Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC5.47□□□□□ -1.53
Lire1P11260 Gm19269-201ENSMUST00000211401 804 ntBASIC5.47□□□□□ -1.53
Lire1P11260 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Lire1P11260 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
Lire1P11260 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC5.47□□□□□ -1.53
Lire1P11260 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Lire1P11260 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Lire1P11260 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Lire1P11260 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Lire1P11260 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Lire1P11260 Gm43312-201ENSMUST00000201655 2466 ntBASIC5.47□□□□□ -1.53
Lire1P11260 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
Lire1P11260 Gm38085-201ENSMUST00000195785 3062 ntBASIC5.46□□□□□ -1.53
Lire1P11260 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
Lire1P11260 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
Lire1P11260 Gm15011-201ENSMUST00000117724 1480 ntBASIC5.46□□□□□ -1.53
Lire1P11260 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Lire1P11260 AC117608.2-201ENSMUST00000224124 1363 ntBASIC5.46□□□□□ -1.54
Lire1P11260 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Lire1P11260 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Lire1P11260 Gm25345-201ENSMUST00000104505 133 ntBASIC5.46□□□□□ -1.54
Lire1P11260 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
Lire1P11260 Gm14382-201ENSMUST00000117374 437 ntBASIC5.46□□□□□ -1.54
Lire1P11260 Gm11984-201ENSMUST00000118142 766 ntBASIC5.46□□□□□ -1.54
Lire1P11260 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC5.46□□□□□ -1.54
Lire1P11260 Gm13818-201ENSMUST00000119441 511 ntBASIC5.46□□□□□ -1.54
Lire1P11260 Gm11483-201ENSMUST00000119839 247 ntBASIC5.46□□□□□ -1.54
Lire1P11260 Gm12115-201ENSMUST00000119969 447 ntBASIC5.46□□□□□ -1.54
Lire1P11260 Gm14977-201ENSMUST00000121626 812 ntBASIC5.46□□□□□ -1.54
Lire1P11260 Gm22276-201ENSMUST00000122469 129 ntBASIC5.46□□□□□ -1.54
Lire1P11260 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Lire1P11260 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Lire1P11260 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Lire1P11260 Gm28625-201ENSMUST00000188309 205 ntBASIC5.46□□□□□ -1.54
Lire1P11260 Gm29664-201ENSMUST00000191125 463 ntBASIC5.46□□□□□ -1.54
Lire1P11260 Gm28877-201ENSMUST00000191349 604 ntBASIC5.46□□□□□ -1.54
Lire1P11260 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Lire1P11260 Ighv1-44-201ENSMUST00000195597 352 ntBASIC5.46□□□□□ -1.54
Lire1P11260 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC5.46□□□□□ -1.54
Lire1P11260 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC5.46□□□□□ -1.54
Lire1P11260 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC5.46□□□□□ -1.54
Lire1P11260 Gm45474-201ENSMUST00000209471 408 ntBASIC5.46□□□□□ -1.54
Lire1P11260 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC5.46□□□□□ -1.54
Lire1P11260 Gm8863-201ENSMUST00000216630 926 ntBASIC5.46□□□□□ -1.54
Lire1P11260 AC073947.1-201ENSMUST00000216991 649 ntBASIC5.46□□□□□ -1.54
Lire1P11260 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Lire1P11260 AC167222.2-201ENSMUST00000220014 295 ntBASIC5.46□□□□□ -1.54
Lire1P11260 Gm18409-202ENSMUST00000220105 529 ntBASIC5.46□□□□□ -1.54
Lire1P11260 AC125190.2-201ENSMUST00000221160 497 ntBASIC5.46□□□□□ -1.54
Lire1P11260 Gm8672-201ENSMUST00000221200 332 ntBASIC5.46□□□□□ -1.54
Lire1P11260 AC122459.2-201ENSMUST00000227099 638 ntBASIC5.46□□□□□ -1.54
Lire1P11260 CT030238.4-203ENSMUST00000227343 836 ntBASIC5.46□□□□□ -1.54
Lire1P11260 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC5.46□□□□□ -1.54
Lire1P11260 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Lire1P11260 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Lire1P11260 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
Lire1P11260 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Lire1P11260 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC5.46□□□□□ -1.54
Lire1P11260 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Lire1P11260 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Lire1P11260 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC5.46□□□□□ -1.54
Lire1P11260 Gm7680-201ENSMUST00000216198 1348 ntBASIC5.46□□□□□ -1.54
Lire1P11260 AC166358.5-201ENSMUST00000220706 1302 ntBASIC5.46□□□□□ -1.54
Lire1P11260 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC5.45□□□□□ -1.54
Lire1P11260 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Lire1P11260 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Lire1P11260 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Lire1P11260 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC5.45□□□□□ -1.54
Lire1P11260 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Lire1P11260 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
Lire1P11260 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Lire1P11260 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Lire1P11260 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Lire1P11260 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.45□□□□□ -1.54
Lire1P11260 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC5.45□□□□□ -1.54
Lire1P11260 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC5.45□□□□□ -1.54
Lire1P11260 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Lire1P11260 Gm13193-201ENSMUST00000117275 225 ntBASIC5.45□□□□□ -1.54
Lire1P11260 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Lire1P11260 Gm15785-201ENSMUST00000119145 694 ntBASIC5.45□□□□□ -1.54
Lire1P11260 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Lire1P11260 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC5.45□□□□□ -1.54
Lire1P11260 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC5.45□□□□□ -1.54
Lire1P11260 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC5.45□□□□□ -1.54
Lire1P11260 Gm22932-201ENSMUST00000175510 72 ntBASIC5.45□□□□□ -1.54
Lire1P11260 Gm3650-201ENSMUST00000180600 747 ntBASIC5.45□□□□□ -1.54
Lire1P11260 Gm28389-201ENSMUST00000190090 697 ntBASIC5.45□□□□□ -1.54
Lire1P11260 Gm37187-201ENSMUST00000193425 341 ntBASIC5.45□□□□□ -1.54
Lire1P11260 Gm20770-201ENSMUST00000193474 694 ntBASIC5.45□□□□□ -1.54
Lire1P11260 Gm42437-201ENSMUST00000197263 923 ntBASIC5.45□□□□□ -1.54
Lire1P11260 Gm6543-201ENSMUST00000197353 808 ntBASIC5.45□□□□□ -1.54
Lire1P11260 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC5.45□□□□□ -1.54
Lire1P11260 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Lire1P11260 AC120011.1-201ENSMUST00000202147 744 ntBASIC5.45□□□□□ -1.54
Lire1P11260 Gm45724-201ENSMUST00000213031 420 ntBASIC5.45□□□□□ -1.54
Lire1P11260 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC5.45□□□□□ -1.54
Lire1P11260 Gm18405-201ENSMUST00000220743 511 ntBASIC5.45□□□□□ -1.54
Lire1P11260 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC5.45□□□□□ -1.54
Lire1P11260 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC5.45□□□□□ -1.54
Lire1P11260 Gm24917-201ENSMUST00000083935 104 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms