Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Chmp6P0C0A3 Gm25846-201ENSMUST00000158013 135 ntBASIC5.72□□□□□ -1.49
Chmp6P0C0A3 Gm24295-201ENSMUST00000158298 131 ntBASIC5.72□□□□□ -1.49
Chmp6P0C0A3 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Chmp6P0C0A3 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Chmp6P0C0A3 Mir6412-201ENSMUST00000184477 97 ntBASIC5.72□□□□□ -1.49
Chmp6P0C0A3 Gm37444-201ENSMUST00000193605 439 ntBASIC5.72□□□□□ -1.49
Chmp6P0C0A3 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC5.72□□□□□ -1.49
Chmp6P0C0A3 Gm7838-201ENSMUST00000203221 1189 ntBASIC5.72□□□□□ -1.49
Chmp6P0C0A3 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC5.72□□□□□ -1.49
Chmp6P0C0A3 AC112956.1-201ENSMUST00000213563 492 ntBASIC5.72□□□□□ -1.49
Chmp6P0C0A3 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC5.72□□□□□ -1.49
Chmp6P0C0A3 AC166323.1-201ENSMUST00000217756 367 ntBASIC5.72□□□□□ -1.49
Chmp6P0C0A3 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC5.72□□□□□ -1.49
Chmp6P0C0A3 AC153800.1-201ENSMUST00000219212 365 ntBASIC5.72□□□□□ -1.49
Chmp6P0C0A3 AC158803.2-201ENSMUST00000219452 679 ntBASIC5.72□□□□□ -1.49
Chmp6P0C0A3 AL807824.1-201ENSMUST00000223151 183 ntBASIC5.72□□□□□ -1.49
Chmp6P0C0A3 AC131997.2-201ENSMUST00000227452 362 ntBASIC5.72□□□□□ -1.49
Chmp6P0C0A3 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.72□□□□□ -1.49
Chmp6P0C0A3 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Chmp6P0C0A3 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Chmp6P0C0A3 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Chmp6P0C0A3 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Chmp6P0C0A3 Gm25139-201ENSMUST00000083247 210 ntBASIC5.72□□□□□ -1.49
Chmp6P0C0A3 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Chmp6P0C0A3 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Chmp6P0C0A3 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Chmp6P0C0A3 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC5.72□□□□□ -1.49
Chmp6P0C0A3 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Chmp6P0C0A3 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.72□□□□□ -1.49
Chmp6P0C0A3 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Chmp6P0C0A3 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Chmp6P0C0A3 Gm44667-201ENSMUST00000207632 3337 ntBASIC5.72□□□□□ -1.49
Chmp6P0C0A3 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Chmp6P0C0A3 Gm38126-201ENSMUST00000195297 4003 ntBASIC5.71□□□□□ -1.49
Chmp6P0C0A3 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.49
Chmp6P0C0A3 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Chmp6P0C0A3 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.49
Chmp6P0C0A3 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.49
Chmp6P0C0A3 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Chmp6P0C0A3 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Chmp6P0C0A3 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Chmp6P0C0A3 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Chmp6P0C0A3 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Chmp6P0C0A3 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Chmp6P0C0A3 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Chmp6P0C0A3 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.71□□□□□ -1.5
Chmp6P0C0A3 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Chmp6P0C0A3 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Chmp6P0C0A3 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Chmp6P0C0A3 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC5.71□□□□□ -1.5
Chmp6P0C0A3 Gm15531-201ENSMUST00000118062 252 ntBASIC5.71□□□□□ -1.5
Chmp6P0C0A3 Gm14769-201ENSMUST00000118590 432 ntBASIC5.71□□□□□ -1.5
Chmp6P0C0A3 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.71□□□□□ -1.5
Chmp6P0C0A3 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Chmp6P0C0A3 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC5.71□□□□□ -1.5
Chmp6P0C0A3 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC5.71□□□□□ -1.5
Chmp6P0C0A3 Gm23964-201ENSMUST00000157966 107 ntBASIC5.71□□□□□ -1.5
Chmp6P0C0A3 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
Chmp6P0C0A3 Gm27849-201ENSMUST00000183673 125 ntBASIC5.71□□□□□ -1.5
Chmp6P0C0A3 Mir7235-201ENSMUST00000183796 56 ntBASIC5.71□□□□□ -1.5
Chmp6P0C0A3 Gm27541-201ENSMUST00000184078 122 ntBASIC5.71□□□□□ -1.5
Chmp6P0C0A3 Gm7496-201ENSMUST00000192573 1034 ntBASIC5.71□□□□□ -1.5
Chmp6P0C0A3 Gm44412-201ENSMUST00000203018 294 ntBASIC5.71□□□□□ -1.5
Chmp6P0C0A3 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5.71□□□□□ -1.5
Chmp6P0C0A3 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC5.71□□□□□ -1.5
Chmp6P0C0A3 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC5.71□□□□□ -1.5
Chmp6P0C0A3 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.71□□□□□ -1.5
Chmp6P0C0A3 CT030182.2-201ENSMUST00000223569 620 ntBASIC5.71□□□□□ -1.5
Chmp6P0C0A3 CT033778.1-201ENSMUST00000224767 767 ntBASIC5.71□□□□□ -1.5
Chmp6P0C0A3 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Chmp6P0C0A3 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Chmp6P0C0A3 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Chmp6P0C0A3 AC153959.1-201ENSMUST00000213617 1694 ntBASIC5.71□□□□□ -1.5
Chmp6P0C0A3 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Chmp6P0C0A3 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC5.71□□□□□ -1.5
Chmp6P0C0A3 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Chmp6P0C0A3 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Chmp6P0C0A3 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Chmp6P0C0A3 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Chmp6P0C0A3 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Gm20287-201ENSMUST00000172848 2367 ntBASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Gm25758-201ENSMUST00000103987 129 ntBASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Gm14871-201ENSMUST00000119056 194 ntBASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Gm15971-201ENSMUST00000119372 211 ntBASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Gm11825-201ENSMUST00000120710 736 ntBASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Gm8256-201ENSMUST00000169178 453 ntBASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Gm8993-201ENSMUST00000182182 983 ntBASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Gm28683-201ENSMUST00000187134 615 ntBASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Gm20561-201ENSMUST00000188131 292 ntBASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Gm28840-205ENSMUST00000189320 615 ntBASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Gm28835-203ENSMUST00000190062 615 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 97.4 ms