Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Gm25389-201ENSMUST00000157340 286 ntBASIC5.45□□□□□ -1.54
Hoxa9P09631 Gm26170-201ENSMUST00000158419 148 ntBASIC5.45□□□□□ -1.54
Hoxa9P09631 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxa9P09631 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC5.45□□□□□ -1.54
Hoxa9P09631 Gm22897-202ENSMUST00000197782 127 ntBASIC5.45□□□□□ -1.54
Hoxa9P09631 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.45□□□□□ -1.54
Hoxa9P09631 Gm44277-201ENSMUST00000205128 649 ntBASIC5.45□□□□□ -1.54
Hoxa9P09631 Gm45908-201ENSMUST00000212977 1177 ntBASIC5.45□□□□□ -1.54
Hoxa9P09631 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.45□□□□□ -1.54
Hoxa9P09631 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.45□□□□□ -1.54
Hoxa9P09631 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxa9P09631 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Hoxa9P09631 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxa9P09631 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Hoxa9P09631 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxa9P09631 Snora30-201ENSMUST00000083325 130 ntBASIC5.45□□□□□ -1.54
Hoxa9P09631 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC5.45□□□□□ -1.54
Hoxa9P09631 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxa9P09631 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxa9P09631 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Hoxa9P09631 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxa9P09631 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxa9P09631 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxa9P09631 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxa9P09631 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxa9P09631 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.45□□□□□ -1.54
Hoxa9P09631 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxa9P09631 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxa9P09631 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Hoxa9P09631 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Hoxa9P09631 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.44□□□□□ -1.54
Hoxa9P09631 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxa9P09631 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Hoxa9P09631 Gm38387-201ENSMUST00000191945 2577 ntBASIC5.44□□□□□ -1.54
Hoxa9P09631 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxa9P09631 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.44□□□□□ -1.54
Hoxa9P09631 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.44□□□□□ -1.54
Hoxa9P09631 Gm24429-201ENSMUST00000104076 132 ntBASIC5.44□□□□□ -1.54
Hoxa9P09631 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC5.44□□□□□ -1.54
Hoxa9P09631 Scarna13-201ENSMUST00000158164 275 ntBASIC5.44□□□□□ -1.54
Hoxa9P09631 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxa9P09631 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC5.44□□□□□ -1.54
Hoxa9P09631 Gm17086-201ENSMUST00000171346 484 ntBASIC5.44□□□□□ -1.54
Hoxa9P09631 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Hoxa9P09631 Gm26731-201ENSMUST00000180683 543 ntBASIC5.44□□□□□ -1.54
Hoxa9P09631 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxa9P09631 Gm27039-201ENSMUST00000182438 962 ntBASIC5.44□□□□□ -1.54
Hoxa9P09631 Gm37370-201ENSMUST00000191996 1410 ntBASIC5.44□□□□□ -1.54
Hoxa9P09631 Gm34176-201ENSMUST00000192621 474 ntBASIC5.44□□□□□ -1.54
Hoxa9P09631 Gm18553-201ENSMUST00000194152 634 ntBASIC5.44□□□□□ -1.54
Hoxa9P09631 Gm37051-201ENSMUST00000194535 2943 ntBASIC5.44□□□□□ -1.54
Hoxa9P09631 Mir409-201ENSMUST00000198153 79 ntBASIC5.44□□□□□ -1.54
Hoxa9P09631 Gm44134-202ENSMUST00000204777 545 ntBASIC5.44□□□□□ -1.54
Hoxa9P09631 Gm45870-201ENSMUST00000211269 601 ntBASIC5.44□□□□□ -1.54
Hoxa9P09631 Gm21041-201ENSMUST00000214829 823 ntBASIC5.44□□□□□ -1.54
Hoxa9P09631 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.44□□□□□ -1.54
Hoxa9P09631 AC155808.1-201ENSMUST00000219288 409 ntBASIC5.44□□□□□ -1.54
Hoxa9P09631 AC121947.1-201ENSMUST00000221755 1145 ntBASIC5.44□□□□□ -1.54
Hoxa9P09631 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC5.44□□□□□ -1.54
Hoxa9P09631 Gm4963-201ENSMUST00000072718 378 ntBASIC5.44□□□□□ -1.54
Hoxa9P09631 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxa9P09631 Gm23514-201ENSMUST00000082827 130 ntBASIC5.44□□□□□ -1.54
Hoxa9P09631 n-R5s88-201ENSMUST00000083173 118 ntBASIC5.44□□□□□ -1.54
Hoxa9P09631 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Hoxa9P09631 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxa9P09631 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxa9P09631 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxa9P09631 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.43□□□□□ -1.54
Hoxa9P09631 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxa9P09631 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.43□□□□□ -1.54
Hoxa9P09631 Gm7919-201ENSMUST00000202043 1389 ntBASIC5.43□□□□□ -1.54
Hoxa9P09631 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Hoxa9P09631 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Hoxa9P09631 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxa9P09631 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxa9P09631 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC5.43□□□□□ -1.54
Hoxa9P09631 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxa9P09631 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC5.43□□□□□ -1.54
Hoxa9P09631 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxa9P09631 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxa9P09631 Gm37631-201ENSMUST00000192275 364 ntBASIC5.43□□□□□ -1.54
Hoxa9P09631 Igkv2-107-201ENSMUST00000196000 313 ntBASIC5.43□□□□□ -1.54
Hoxa9P09631 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC5.43□□□□□ -1.54
Hoxa9P09631 Gm9173-201ENSMUST00000198054 400 ntBASIC5.43□□□□□ -1.54
Hoxa9P09631 Gm45215-201ENSMUST00000206407 395 ntBASIC5.43□□□□□ -1.54
Hoxa9P09631 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC5.43□□□□□ -1.54
Hoxa9P09631 Gm45690-201ENSMUST00000210775 246 ntBASIC5.43□□□□□ -1.54
Hoxa9P09631 Gm18255-201ENSMUST00000211316 765 ntBASIC5.43□□□□□ -1.54
Hoxa9P09631 Gm8137-201ENSMUST00000218997 463 ntBASIC5.43□□□□□ -1.54
Hoxa9P09631 AC164567.4-201ENSMUST00000219708 483 ntBASIC5.43□□□□□ -1.54
Hoxa9P09631 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxa9P09631 AC154323.1-201ENSMUST00000228329 1231 ntBASIC5.43□□□□□ -1.54
Hoxa9P09631 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxa9P09631 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Hoxa9P09631 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Hoxa9P09631 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Hoxa9P09631 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxa9P09631 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC5.43□□□□□ -1.54
Hoxa9P09631 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Hoxa9P09631 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 130.7 ms