Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxd3P09027 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC5.71□□□□□ -1.5
Hoxd3P09027 Gm15732-201ENSMUST00000079794 480 ntBASIC5.71□□□□□ -1.5
Hoxd3P09027 Snord42a-201ENSMUST00000082606 65 ntBASIC5.71□□□□□ -1.5
Hoxd3P09027 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC5.71□□□□□ -1.5
Hoxd3P09027 Gm6166-201ENSMUST00000098689 409 ntBASIC5.71□□□□□ -1.5
Hoxd3P09027 Gm9403-201ENSMUST00000196299 2181 ntBASIC5.71□□□□□ -1.5
Hoxd3P09027 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5.71□□□□□ -1.5
Hoxd3P09027 Gm4541-201ENSMUST00000208901 1848 ntBASIC5.71□□□□□ -1.5
Hoxd3P09027 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxd3P09027 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxd3P09027 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Hoxd3P09027 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxd3P09027 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxd3P09027 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxd3P09027 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxd3P09027 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxd3P09027 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxd3P09027 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxd3P09027 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Hoxd3P09027 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC5.71□□□□□ -1.5
Hoxd3P09027 Gm37457-201ENSMUST00000193639 2433 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Hoxd3P09027 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd3P09027 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm44117-201ENSMUST00000204442 1758 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
Hoxd3P09027 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm7451-201ENSMUST00000208382 1392 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm18701-201ENSMUST00000188281 1536 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Hoxd3P09027 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Hoxd3P09027 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd3P09027 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd3P09027 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Hoxd3P09027 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm9429-201ENSMUST00000117804 868 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm13064-201ENSMUST00000119125 557 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm15153-201ENSMUST00000119867 274 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm12543-201ENSMUST00000120410 543 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm25784-201ENSMUST00000122524 81 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd3P09027 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm24857-201ENSMUST00000158061 310 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm23016-201ENSMUST00000158431 62 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm8292-201ENSMUST00000162574 396 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm17081-201ENSMUST00000167363 478 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm24863-201ENSMUST00000179499 107 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm27026-201ENSMUST00000183003 892 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm27348-201ENSMUST00000184511 170 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC5.7□□□□□ -1.5
Hoxd3P09027 Ighv12-2-201ENSMUST00000191949 362 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm7369-201ENSMUST00000192738 936 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm42539-201ENSMUST00000197009 308 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC5.7□□□□□ -1.5
Hoxd3P09027 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd3P09027 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm44523-201ENSMUST00000205616 417 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm45048-201ENSMUST00000207058 429 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm44858-201ENSMUST00000207360 154 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm45628-201ENSMUST00000210849 274 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd3P09027 CT025685.1-201ENSMUST00000213716 150 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 AC120002.1-201ENSMUST00000218456 331 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm18507-201ENSMUST00000218855 525 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC5.7□□□□□ -1.5
Hoxd3P09027 AC119241.1-201ENSMUST00000223651 534 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 AC115289.1-201ENSMUST00000224915 522 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 AC134869.2-201ENSMUST00000225788 421 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 AC165155.1-201ENSMUST00000228932 445 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Hoxd3P09027 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
Hoxd3P09027 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Hoxd3P09027 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm8724-201ENSMUST00000081668 483 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm22169-201ENSMUST00000083229 107 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm24411-201ENSMUST00000083428 131 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd3P09027 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd3P09027 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd3P09027 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd3P09027 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm43718-201ENSMUST00000197524 1857 ntBASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd3P09027 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd3P09027 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd3P09027 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxd3P09027 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms