Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Gm37101-201ENSMUST00000191656 3660 ntBASIC5.49□□□□□ -1.53
Hcn3O88705 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Hcn3O88705 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Hcn3O88705 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
Hcn3O88705 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hcn3O88705 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hcn3O88705 Gm37051-201ENSMUST00000194535 2943 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Hcn3O88705 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Hcn3O88705 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Hcn3O88705 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Hcn3O88705 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hcn3O88705 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Hcn3O88705 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Hcn3O88705 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Hcn3O88705 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Hcn3O88705 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hcn3O88705 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC5.48□□□□□ -1.53
Hcn3O88705 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Hcn3O88705 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.48□□□□□ -1.53
Hcn3O88705 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 Gm22952-201ENSMUST00000116720 120 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 Gm12090-201ENSMUST00000118692 758 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 Gm11708-201ENSMUST00000119530 832 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 Gm16053-201ENSMUST00000120511 188 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 Gm15152-201ENSMUST00000121540 394 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 Gm14800-201ENSMUST00000122084 1272 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 Gm15885-201ENSMUST00000122114 388 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Hcn3O88705 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC5.48□□□□□ -1.53
Hcn3O88705 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Hcn3O88705 Gm25117-201ENSMUST00000157194 144 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 Gm23903-201ENSMUST00000157566 131 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 Gm24186-201ENSMUST00000157983 127 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 Gm22158-201ENSMUST00000158411 126 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC5.48□□□□□ -1.53
Hcn3O88705 Gm10087-201ENSMUST00000167650 330 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Hcn3O88705 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
Hcn3O88705 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Hcn3O88705 Gm29124-201ENSMUST00000186576 452 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Hcn3O88705 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Hcn3O88705 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 Gm37213-201ENSMUST00000193077 586 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC5.48□□□□□ -1.53
Hcn3O88705 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC5.48□□□□□ -1.53
Hcn3O88705 Gm18598-201ENSMUST00000207724 597 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
Hcn3O88705 AC153932.1-201ENSMUST00000218558 787 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 AC151904.3-201ENSMUST00000219266 895 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Hcn3O88705 AC124732.4-201ENSMUST00000220930 1274 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC5.48□□□□□ -1.53
Hcn3O88705 AC117656.3-204ENSMUST00000225656 859 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 AC164618.1-201ENSMUST00000225769 592 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 AC122459.2-201ENSMUST00000227099 638 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hcn3O88705 Snord59a-201ENSMUST00000082844 74 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 Gm24041-201ENSMUST00000083115 156 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Hcn3O88705 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Hcn3O88705 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Hcn3O88705 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC5.48□□□□□ -1.53
Hcn3O88705 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hcn3O88705 AC149294.7-201ENSMUST00000227475 1432 ntBASIC5.48□□□□□ -1.53
Hcn3O88705 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hcn3O88705 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
Hcn3O88705 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Hcn3O88705 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.47□□□□□ -1.53
Hcn3O88705 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.47□□□□□ -1.53
Hcn3O88705 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Hcn3O88705 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC5.47□□□□□ -1.53
Hcn3O88705 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hcn3O88705 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Hcn3O88705 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.47□□□□□ -1.53
Hcn3O88705 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hcn3O88705 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Hcn3O88705 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Hcn3O88705 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Hcn3O88705 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Hcn3O88705 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Hcn3O88705 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Hcn3O88705 Gm14580-201ENSMUST00000119122 718 ntBASIC5.47□□□□□ -1.53
Hcn3O88705 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hcn3O88705 Gm15390-201ENSMUST00000120323 738 ntBASIC5.47□□□□□ -1.53
Hcn3O88705 Gm13080-201ENSMUST00000120556 420 ntBASIC5.47□□□□□ -1.53
Hcn3O88705 Gm14563-201ENSMUST00000120571 354 ntBASIC5.47□□□□□ -1.53
Hcn3O88705 Gm11341-201ENSMUST00000122316 447 ntBASIC5.47□□□□□ -1.53
Hcn3O88705 Gm24840-201ENSMUST00000122603 147 ntBASIC5.47□□□□□ -1.53
Hcn3O88705 Gm24380-201ENSMUST00000122696 324 ntBASIC5.47□□□□□ -1.53
Hcn3O88705 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 102.6 ms