Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Gm37079-201ENSMUST00000194114 2135 ntBASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Gm44735-201ENSMUST00000206197 1752 ntBASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Gm43781-201ENSMUST00000197634 2681 ntBASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Gm4994-201ENSMUST00000118379 2187 ntBASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Gm25564-201ENSMUST00000104604 132 ntBASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Gm11914-201ENSMUST00000117094 507 ntBASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Gm15385-201ENSMUST00000118725 667 ntBASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Gm6142-201ENSMUST00000120290 325 ntBASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Gm13357-201ENSMUST00000120528 537 ntBASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Gm5578-201ENSMUST00000121490 1236 ntBASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Mir3473e-201ENSMUST00000183932 110 ntBASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Igkv4-77-201ENSMUST00000199410 352 ntBASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Gm43841-201ENSMUST00000199491 586 ntBASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Gm43954-201ENSMUST00000204634 544 ntBASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Gm29920-201ENSMUST00000206876 754 ntBASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Gm4585-201ENSMUST00000207218 452 ntBASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Gm2961-201ENSMUST00000211074 772 ntBASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 AC167977.1-201ENSMUST00000221384 234 ntBASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Gm6575-201ENSMUST00000222946 697 ntBASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Gm36262-201ENSMUST00000223274 499 ntBASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 AC129935.1-201ENSMUST00000226302 873 ntBASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 AC123917.1-201ENSMUST00000228063 1048 ntBASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 AC122459.3-201ENSMUST00000228508 1042 ntBASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Gm23452-201ENSMUST00000083327 107 ntBASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Gm23516-201ENSMUST00000093728 107 ntBASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Fam35a-206ENSMUST00000228626 3100 ntBASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Gm38062-201ENSMUST00000192541 1856 ntBASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Gm42894-201ENSMUST00000200788 3390 ntBASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Gm42727-201ENSMUST00000202446 2823 ntBASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Pcdh1F7BJK1 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 AC164107.1-202ENSMUST00000228953 1816 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm44416-201ENSMUST00000204055 2066 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm9144-201ENSMUST00000101625 1008 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm26422-201ENSMUST00000104276 132 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm22771-201ENSMUST00000104449 91 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm11517-201ENSMUST00000119491 387 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm11553-201ENSMUST00000120682 240 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm15349-201ENSMUST00000121154 204 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm16330-201ENSMUST00000128324 297 ntBASIC5.67□□□□□ -1.5
Pcdh1F7BJK1 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms