Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Srp54bE9PXC0 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Srp54bE9PXC0 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.43□□□□□ -1.54
Srp54bE9PXC0 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.43□□□□□ -1.54
Srp54bE9PXC0 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Srp54bE9PXC0 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
Srp54bE9PXC0 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Srp54bE9PXC0 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
Srp54bE9PXC0 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
Srp54bE9PXC0 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 AC140299.2-201ENSMUST00000219546 1969 ntBASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Gm20287-201ENSMUST00000172848 2367 ntBASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 AC156031.1-201ENSMUST00000217288 2555 ntBASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Gm14512-201ENSMUST00000117924 230 ntBASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Gm11805-201ENSMUST00000121238 600 ntBASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Gm23964-201ENSMUST00000157966 107 ntBASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Gm22116-201ENSMUST00000158791 141 ntBASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Gm15812-201ENSMUST00000162331 748 ntBASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Gm20545-201ENSMUST00000174739 210 ntBASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Gm23631-201ENSMUST00000175291 123 ntBASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Gm23633-201ENSMUST00000175293 119 ntBASIC5.42□□□□□ -1.54
Srp54bE9PXC0 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Gm8604-201ENSMUST00000183150 965 ntBASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Mir6374-201ENSMUST00000184003 107 ntBASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Gm27193-201ENSMUST00000184217 586 ntBASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Gm29596-201ENSMUST00000185710 385 ntBASIC5.42□□□□□ -1.54
Srp54bE9PXC0 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Gm28061-201ENSMUST00000189085 807 ntBASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.42□□□□□ -1.54
Srp54bE9PXC0 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Gm18215-201ENSMUST00000204429 798 ntBASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Gm45845-201ENSMUST00000207326 582 ntBASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Gm45157-201ENSMUST00000208729 401 ntBASIC5.42□□□□□ -1.54
Srp54bE9PXC0 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Gm40692-201ENSMUST00000220411 491 ntBASIC5.42□□□□□ -1.54
Srp54bE9PXC0 AC154851.2-201ENSMUST00000222172 644 ntBASIC5.42□□□□□ -1.54
Srp54bE9PXC0 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Mir129-1-201ENSMUST00000083535 73 ntBASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Gm5844-201ENSMUST00000119417 2191 ntBASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.42□□□□□ -1.54
Srp54bE9PXC0 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.41□□□□□ -1.54
Srp54bE9PXC0 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC5.41□□□□□ -1.54
Srp54bE9PXC0 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.41□□□□□ -1.54
Srp54bE9PXC0 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.41□□□□□ -1.54
Srp54bE9PXC0 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.41□□□□□ -1.54
Srp54bE9PXC0 Gm45493-201ENSMUST00000209494 3948 ntBASIC5.41□□□□□ -1.54
Srp54bE9PXC0 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Srp54bE9PXC0 Gm11743-201ENSMUST00000117385 1735 ntBASIC5.41□□□□□ -1.54
Srp54bE9PXC0 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Srp54bE9PXC0 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Srp54bE9PXC0 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Srp54bE9PXC0 Gm11975-201ENSMUST00000118772 481 ntBASIC5.41□□□□□ -1.54
Srp54bE9PXC0 Gm7670-201ENSMUST00000121272 641 ntBASIC5.41□□□□□ -1.54
Srp54bE9PXC0 Gm14369-201ENSMUST00000121355 285 ntBASIC5.41□□□□□ -1.54
Srp54bE9PXC0 Gm12322-201ENSMUST00000121605 389 ntBASIC5.41□□□□□ -1.54
Srp54bE9PXC0 Gm7609-204ENSMUST00000161424 461 ntBASIC5.41□□□□□ -1.54
Srp54bE9PXC0 Mir6343-201ENSMUST00000183584 84 ntBASIC5.41□□□□□ -1.54
Srp54bE9PXC0 Gm27541-201ENSMUST00000184078 122 ntBASIC5.41□□□□□ -1.54
Srp54bE9PXC0 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Srp54bE9PXC0 Gm7496-201ENSMUST00000192573 1034 ntBASIC5.41□□□□□ -1.54
Srp54bE9PXC0 Gm17952-201ENSMUST00000193914 747 ntBASIC5.41□□□□□ -1.54
Srp54bE9PXC0 Gm18553-201ENSMUST00000194152 634 ntBASIC5.41□□□□□ -1.54
Srp54bE9PXC0 Gm37720-201ENSMUST00000195497 1241 ntBASIC5.41□□□□□ -1.54
Srp54bE9PXC0 Gm42776-201ENSMUST00000198031 406 ntBASIC5.41□□□□□ -1.54
Srp54bE9PXC0 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC5.41□□□□□ -1.54
Srp54bE9PXC0 Gm7588-201ENSMUST00000216866 571 ntBASIC5.41□□□□□ -1.54
Srp54bE9PXC0 CT030124.1-201ENSMUST00000217130 235 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms