Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC5.4□□□□□ -1.55
Col4a6B1AVK5 Gm11447-201ENSMUST00000118983 858 ntBASIC5.4□□□□□ -1.55
Col4a6B1AVK5 Gm11790-201ENSMUST00000119569 455 ntBASIC5.4□□□□□ -1.55
Col4a6B1AVK5 Gm12413-201ENSMUST00000121508 312 ntBASIC5.4□□□□□ -1.55
Col4a6B1AVK5 Gm12807-201ENSMUST00000121546 962 ntBASIC5.4□□□□□ -1.55
Col4a6B1AVK5 Gm12110-201ENSMUST00000121601 579 ntBASIC5.4□□□□□ -1.55
Col4a6B1AVK5 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC5.4□□□□□ -1.55
Col4a6B1AVK5 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Col4a6B1AVK5 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.55
Col4a6B1AVK5 Gm27387-201ENSMUST00000184583 116 ntBASIC5.4□□□□□ -1.55
Col4a6B1AVK5 Gm27611-201ENSMUST00000184690 108 ntBASIC5.4□□□□□ -1.55
Col4a6B1AVK5 Gm28116-201ENSMUST00000189064 387 ntBASIC5.4□□□□□ -1.55
Col4a6B1AVK5 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC5.4□□□□□ -1.55
Col4a6B1AVK5 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC5.4□□□□□ -1.55
Col4a6B1AVK5 Gm43136-201ENSMUST00000200403 636 ntBASIC5.4□□□□□ -1.55
Col4a6B1AVK5 Gm44214-201ENSMUST00000204153 606 ntBASIC5.4□□□□□ -1.55
Col4a6B1AVK5 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC5.4□□□□□ -1.55
Col4a6B1AVK5 AC156576.2-202ENSMUST00000222525 411 ntBASIC5.4□□□□□ -1.55
Col4a6B1AVK5 AC125399.1-201ENSMUST00000224236 595 ntBASIC5.4□□□□□ -1.55
Col4a6B1AVK5 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.4□□□□□ -1.55
Col4a6B1AVK5 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
Col4a6B1AVK5 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
Col4a6B1AVK5 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Col4a6B1AVK5 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Col4a6B1AVK5 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.4□□□□□ -1.55
Col4a6B1AVK5 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC5.4□□□□□ -1.55
Col4a6B1AVK5 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC5.4□□□□□ -1.55
Col4a6B1AVK5 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col4a6B1AVK5 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col4a6B1AVK5 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.39□□□□□ -1.55
Col4a6B1AVK5 Gm37916-201ENSMUST00000192153 2435 ntBASIC5.39□□□□□ -1.55
Col4a6B1AVK5 Gm20789-201ENSMUST00000221002 4195 ntBASIC5.39□□□□□ -1.55
Col4a6B1AVK5 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col4a6B1AVK5 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col4a6B1AVK5 Gm23193-201ENSMUST00000102427 82 ntBASIC5.39□□□□□ -1.55
Col4a6B1AVK5 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Col4a6B1AVK5 Gm22204-201ENSMUST00000122654 327 ntBASIC5.39□□□□□ -1.55
Col4a6B1AVK5 Gm24175-201ENSMUST00000158931 129 ntBASIC5.39□□□□□ -1.55
Col4a6B1AVK5 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Col4a6B1AVK5 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col4a6B1AVK5 Gm20673-201ENSMUST00000177167 430 ntBASIC5.39□□□□□ -1.55
Col4a6B1AVK5 Gm21856-201ENSMUST00000187547 696 ntBASIC5.39□□□□□ -1.55
Col4a6B1AVK5 Gm38046-201ENSMUST00000192733 550 ntBASIC5.39□□□□□ -1.55
Col4a6B1AVK5 Gm37444-201ENSMUST00000193605 439 ntBASIC5.39□□□□□ -1.55
Col4a6B1AVK5 Gm32308-201ENSMUST00000203053 280 ntBASIC5.39□□□□□ -1.55
Col4a6B1AVK5 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col4a6B1AVK5 Gm45209-201ENSMUST00000207122 353 ntBASIC5.39□□□□□ -1.55
Col4a6B1AVK5 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC5.39□□□□□ -1.55
Col4a6B1AVK5 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col4a6B1AVK5 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC5.39□□□□□ -1.55
Col4a6B1AVK5 AC133910.1-201ENSMUST00000228128 624 ntBASIC5.39□□□□□ -1.55
Col4a6B1AVK5 Gm45001-201ENSMUST00000208279 2515 ntBASIC5.39□□□□□ -1.55
Col4a6B1AVK5 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.39□□□□□ -1.55
Col4a6B1AVK5 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col4a6B1AVK5 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC5.39□□□□□ -1.55
Col4a6B1AVK5 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col4a6B1AVK5 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col4a6B1AVK5 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
Col4a6B1AVK5 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col4a6B1AVK5 Gm20644-201ENSMUST00000176721 2063 ntBASIC5.38□□□□□ -1.55
Col4a6B1AVK5 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Col4a6B1AVK5 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col4a6B1AVK5 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
Col4a6B1AVK5 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col4a6B1AVK5 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col4a6B1AVK5 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col4a6B1AVK5 Gm5777-201ENSMUST00000177265 448 ntBASIC5.38□□□□□ -1.55
Col4a6B1AVK5 Gm23925-202ENSMUST00000188429 132 ntBASIC5.38□□□□□ -1.55
Col4a6B1AVK5 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col4a6B1AVK5 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.38□□□□□ -1.55
Col4a6B1AVK5 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC5.38□□□□□ -1.55
Col4a6B1AVK5 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col4a6B1AVK5 n-R5s170-201ENSMUST00000083726 113 ntBASIC5.38□□□□□ -1.55
Col4a6B1AVK5 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col4a6B1AVK5 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC5.38□□□□□ -1.55
Col4a6B1AVK5 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC5.38□□□□□ -1.55
Col4a6B1AVK5 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Col4a6B1AVK5 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col4a6B1AVK5 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Col4a6B1AVK5 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Col4a6B1AVK5 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col4a6B1AVK5 Gm37057-201ENSMUST00000192624 1916 ntBASIC5.38□□□□□ -1.55
Col4a6B1AVK5 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col4a6B1AVK5 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col4a6B1AVK5 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col4a6B1AVK5 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col4a6B1AVK5 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col4a6B1AVK5 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Col4a6B1AVK5 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Col4a6B1AVK5 Gm2099-202ENSMUST00000223310 3341 ntBASIC5.38□□□□□ -1.55
Col4a6B1AVK5 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col4a6B1AVK5 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Col4a6B1AVK5 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Gm11633-201ENSMUST00000118176 444 ntBASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC5.37□□□□□ -1.55
Col4a6B1AVK5 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Gm6632-201ENSMUST00000168425 954 ntBASIC5.37□□□□□ -1.55
Col4a6B1AVK5 Gm27492-201ENSMUST00000185194 187 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms