Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Igkv12-67-201ENSMUST00000197806 354 ntBASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Gm43108-201ENSMUST00000200525 293 ntBASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Gm44380-201ENSMUST00000203125 293 ntBASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Gm4605-201ENSMUST00000203148 625 ntBASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Gm5314-201ENSMUST00000204852 466 ntBASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC6.41□□□□□ -1.38
Trim39Q9ESN2 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Gm19033-201ENSMUST00000208516 964 ntBASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Gm45312-201ENSMUST00000210566 311 ntBASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Gm18903-201ENSMUST00000215343 480 ntBASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Gm7530-201ENSMUST00000218466 605 ntBASIC6.41□□□□□ -1.38
Trim39Q9ESN2 B230303A05Rik-202ENSMUST00000220728 478 ntBASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Gm4263-202ENSMUST00000221392 667 ntBASIC6.41□□□□□ -1.38
Trim39Q9ESN2 AC154552.4-201ENSMUST00000222171 151 ntBASIC6.41□□□□□ -1.38
Trim39Q9ESN2 AC154335.1-201ENSMUST00000224744 395 ntBASIC6.41□□□□□ -1.38
Trim39Q9ESN2 AC160999.1-201ENSMUST00000225675 810 ntBASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Trim39Q9ESN2 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Gm24460-201ENSMUST00000082731 106 ntBASIC6.41□□□□□ -1.38
Trim39Q9ESN2 n-R5s156-201ENSMUST00000083377 105 ntBASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Gm6215-201ENSMUST00000119297 1386 ntBASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Gm7905-201ENSMUST00000119933 1386 ntBASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Gm6207-201ENSMUST00000120075 1386 ntBASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Gm15229-201ENSMUST00000146636 1398 ntBASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Gm6228-201ENSMUST00000178856 1386 ntBASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Gm6221-201ENSMUST00000180064 1386 ntBASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Gm18954-201ENSMUST00000222200 1792 ntBASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Trim39Q9ESN2 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC6.4□□□□□ -1.38
Trim39Q9ESN2 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Trim39Q9ESN2 AC153971.1-201ENSMUST00000215097 3811 ntBASIC6.4□□□□□ -1.38
Trim39Q9ESN2 CT009480.2-201ENSMUST00000225152 3369 ntBASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Gm45290-201ENSMUST00000211177 3890 ntBASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Gm20276-201ENSMUST00000216122 2648 ntBASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Gm43330-201ENSMUST00000199706 2153 ntBASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Gm22671-201ENSMUST00000104420 134 ntBASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Gm13400-201ENSMUST00000117436 380 ntBASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Gm13878-201ENSMUST00000117986 577 ntBASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Gm8624-201ENSMUST00000118083 432 ntBASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Gm15078-201ENSMUST00000118371 782 ntBASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Gm13482-201ENSMUST00000119842 254 ntBASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Gm5135-201ENSMUST00000121100 573 ntBASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC6.4□□□□□ -1.38
Trim39Q9ESN2 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Gm7855-201ENSMUST00000137737 687 ntBASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Gm22158-201ENSMUST00000158411 126 ntBASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Gm24057-201ENSMUST00000158616 302 ntBASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Gm25163-201ENSMUST00000158905 104 ntBASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Gm8338-201ENSMUST00000163928 363 ntBASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Gm28016-201ENSMUST00000184594 196 ntBASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Gm18501-201ENSMUST00000185363 664 ntBASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC6.4□□□□□ -1.38
Trim39Q9ESN2 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms