Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Lima1Q9ERG0 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Lima1Q9ERG0 AC154368.2-201ENSMUST00000222334 1724 ntBASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Lima1Q9ERG0 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Gm25422-201ENSMUST00000104219 129 ntBASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Gm22592-201ENSMUST00000104242 131 ntBASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Gm14711-201ENSMUST00000117056 217 ntBASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Gm12244-201ENSMUST00000119500 291 ntBASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Gm11278-201ENSMUST00000121002 997 ntBASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Gm23211-201ENSMUST00000122717 308 ntBASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Gm25660-201ENSMUST00000158470 104 ntBASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Gm25489-201ENSMUST00000158727 141 ntBASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Gm8837-201ENSMUST00000161037 1107 ntBASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Gm38131-201ENSMUST00000192449 430 ntBASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Gm20940-201ENSMUST00000197308 360 ntBASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Gm20997-201ENSMUST00000205148 231 ntBASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Gm44673-201ENSMUST00000205692 996 ntBASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC5.12□□□□□ -1.59
Lima1Q9ERG0 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Gm23511-201ENSMUST00000083084 164 ntBASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.12□□□□□ -1.59
Lima1Q9ERG0 AC159326.1-201ENSMUST00000219989 1302 ntBASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Lima1Q9ERG0 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Lima1Q9ERG0 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Gm13681-201ENSMUST00000117925 210 ntBASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Gm5381-201ENSMUST00000117975 1250 ntBASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Gm11212-201ENSMUST00000118337 618 ntBASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Gm23030-201ENSMUST00000158004 273 ntBASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Gm22518-201ENSMUST00000158267 68 ntBASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Gm6808-201ENSMUST00000162341 807 ntBASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Gm6055-201ENSMUST00000180532 378 ntBASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Gm38015-201ENSMUST00000193048 188 ntBASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Gm42694-201ENSMUST00000196951 358 ntBASIC5.11□□□□□ -1.59
Lima1Q9ERG0 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Gm43093-201ENSMUST00000202439 1213 ntBASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Gm34149-201ENSMUST00000203547 304 ntBASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Gm18011-201ENSMUST00000203717 565 ntBASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Gm45734-201ENSMUST00000211916 411 ntBASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Lima1Q9ERG0 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Gm6477-201ENSMUST00000217098 764 ntBASIC5.11□□□□□ -1.59
Lima1Q9ERG0 AC153548.2-201ENSMUST00000219770 885 ntBASIC5.11□□□□□ -1.59
Lima1Q9ERG0 AC127242.4-201ENSMUST00000221242 470 ntBASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC5.11□□□□□ -1.59
Lima1Q9ERG0 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Lima1Q9ERG0 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
Lima1Q9ERG0 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
Lima1Q9ERG0 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
Lima1Q9ERG0 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Lima1Q9ERG0 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Lima1Q9ERG0 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Lima1Q9ERG0 Gm11970-201ENSMUST00000116105 320 ntBASIC5.1□□□□□ -1.59
Lima1Q9ERG0 Gm13195-201ENSMUST00000117229 261 ntBASIC5.1□□□□□ -1.59
Lima1Q9ERG0 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Lima1Q9ERG0 Gm13245-201ENSMUST00000119646 260 ntBASIC5.1□□□□□ -1.59
Lima1Q9ERG0 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Lima1Q9ERG0 Gm12583-201ENSMUST00000120677 853 ntBASIC5.1□□□□□ -1.59
Lima1Q9ERG0 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 240.4 ms