Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 V1rg10-201ENSMUST00000183378 937 ntBASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm28066-201ENSMUST00000188657 472 ntBASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm37866-201ENSMUST00000191950 696 ntBASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm36966-201ENSMUST00000192217 413 ntBASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm2367-201ENSMUST00000192374 472 ntBASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm38213-201ENSMUST00000193203 173 ntBASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm44431-201ENSMUST00000203500 413 ntBASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm7890-201ENSMUST00000204877 601 ntBASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm45082-201ENSMUST00000206082 601 ntBASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm45157-201ENSMUST00000208729 401 ntBASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm272-201ENSMUST00000222073 919 ntBASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 AC158981.3-201ENSMUST00000226844 1024 ntBASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 AC132918.1-201ENSMUST00000227877 925 ntBASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 CT030662.3-201ENSMUST00000228751 476 ntBASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Tubb3Q9ERD7 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Tubb3Q9ERD7 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Tubb3Q9ERD7 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Tubb3Q9ERD7 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Tubb3Q9ERD7 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Tubb3Q9ERD7 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Tubb3Q9ERD7 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Tubb3Q9ERD7 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.69□□□□□ -1.5
Tubb3Q9ERD7 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
Tubb3Q9ERD7 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Tubb3Q9ERD7 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC5.69□□□□□ -1.5
Tubb3Q9ERD7 Gm22499-201ENSMUST00000104501 135 ntBASIC5.69□□□□□ -1.5
Tubb3Q9ERD7 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Tubb3Q9ERD7 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Tubb3Q9ERD7 Gm11105-201ENSMUST00000112781 478 ntBASIC5.69□□□□□ -1.5
Tubb3Q9ERD7 Gm12077-201ENSMUST00000117049 364 ntBASIC5.69□□□□□ -1.5
Tubb3Q9ERD7 Gm13359-201ENSMUST00000119000 695 ntBASIC5.69□□□□□ -1.5
Tubb3Q9ERD7 Gm13013-201ENSMUST00000119087 523 ntBASIC5.69□□□□□ -1.5
Tubb3Q9ERD7 Gm15828-201ENSMUST00000119911 522 ntBASIC5.69□□□□□ -1.5
Tubb3Q9ERD7 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC5.69□□□□□ -1.5
Tubb3Q9ERD7 Gm11389-201ENSMUST00000121407 430 ntBASIC5.69□□□□□ -1.5
Tubb3Q9ERD7 Gm14122-201ENSMUST00000122076 973 ntBASIC5.69□□□□□ -1.5
Tubb3Q9ERD7 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC5.69□□□□□ -1.5
Tubb3Q9ERD7 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Tubb3Q9ERD7 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC5.69□□□□□ -1.5
Tubb3Q9ERD7 Gm22724-201ENSMUST00000158091 127 ntBASIC5.69□□□□□ -1.5
Tubb3Q9ERD7 Gm22160-201ENSMUST00000158405 328 ntBASIC5.69□□□□□ -1.5
Tubb3Q9ERD7 Gm25445-201ENSMUST00000158996 299 ntBASIC5.69□□□□□ -1.5
Tubb3Q9ERD7 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Tubb3Q9ERD7 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Tubb3Q9ERD7 Gm21772-201ENSMUST00000169213 478 ntBASIC5.69□□□□□ -1.5
Tubb3Q9ERD7 Gm17126-201ENSMUST00000172276 523 ntBASIC5.69□□□□□ -1.5
Tubb3Q9ERD7 Gm20401-201ENSMUST00000173717 212 ntBASIC5.69□□□□□ -1.5
Tubb3Q9ERD7 Mirt2-201ENSMUST00000175179 285 ntBASIC5.69□□□□□ -1.5
Tubb3Q9ERD7 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms