Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Nsd1-207ENSMUST00000224973 9905 ntBASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm43209-201ENSMUST00000198949 1588 ntBASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm15016-201ENSMUST00000117300 720 ntBASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm14307-201ENSMUST00000118930 291 ntBASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm11913-201ENSMUST00000119094 336 ntBASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm12094-201ENSMUST00000121781 472 ntBASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm23888-201ENSMUST00000122690 253 ntBASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm14297-201ENSMUST00000129110 291 ntBASIC7.22□□□□□ -1.25
Trim11Q99PQ2 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm23025-201ENSMUST00000158769 111 ntBASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm16297-201ENSMUST00000161466 459 ntBASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm17919-201ENSMUST00000173344 312 ntBASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm25284-201ENSMUST00000180345 141 ntBASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm27853-201ENSMUST00000184176 250 ntBASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm28343-201ENSMUST00000185386 112 ntBASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm18185-201ENSMUST00000186725 667 ntBASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm18342-201ENSMUST00000186987 694 ntBASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm2427-201ENSMUST00000189121 881 ntBASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Ighv1-21-201ENSMUST00000194856 351 ntBASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm44142-201ENSMUST00000203358 311 ntBASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm44718-201ENSMUST00000206886 359 ntBASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC7.22□□□□□ -1.25
Trim11Q99PQ2 AC165292.1-201ENSMUST00000215218 620 ntBASIC7.22□□□□□ -1.25
Trim11Q99PQ2 AC167222.2-201ENSMUST00000220014 295 ntBASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Trim11Q99PQ2 AC105950.1-201ENSMUST00000222637 408 ntBASIC7.22□□□□□ -1.25
Trim11Q99PQ2 CT030184.2-201ENSMUST00000223064 263 ntBASIC7.22□□□□□ -1.25
Trim11Q99PQ2 AC122459.3-201ENSMUST00000228508 1042 ntBASIC7.22□□□□□ -1.25
Trim11Q99PQ2 AC154838.1-201ENSMUST00000228944 911 ntBASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm15732-201ENSMUST00000079794 480 ntBASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm25578-201ENSMUST00000083406 104 ntBASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm37703-201ENSMUST00000192292 1784 ntBASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm37936-201ENSMUST00000194647 1322 ntBASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm37342-201ENSMUST00000194588 4965 ntBASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC7.22□□□□□ -1.25
Trim11Q99PQ2 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Gm9408-201ENSMUST00000197375 1505 ntBASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC7.22□□□□□ -1.25
Trim11Q99PQ2 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Trim11Q99PQ2 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Trim11Q99PQ2 Gm14896-201ENSMUST00000121311 1351 ntBASIC7.21□□□□□ -1.25
Trim11Q99PQ2 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC7.21□□□□□ -1.25
Trim11Q99PQ2 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
Trim11Q99PQ2 Gm37181-201ENSMUST00000192513 1727 ntBASIC7.21□□□□□ -1.25
Trim11Q99PQ2 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Trim11Q99PQ2 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Trim11Q99PQ2 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
Trim11Q99PQ2 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Trim11Q99PQ2 Gm38090-201ENSMUST00000195733 1942 ntBASIC7.21□□□□□ -1.25
Trim11Q99PQ2 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
Trim11Q99PQ2 Gm37725-201ENSMUST00000193965 2125 ntBASIC7.21□□□□□ -1.25
Trim11Q99PQ2 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Trim11Q99PQ2 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Trim11Q99PQ2 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Gm15901-201ENSMUST00000117663 941 ntBASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Gm13455-201ENSMUST00000118767 517 ntBASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Gm8855-201ENSMUST00000118888 878 ntBASIC7.21□□□□□ -1.26
Trim11Q99PQ2 H3f3c-201ENSMUST00000119459 411 ntBASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Gm12115-201ENSMUST00000119969 447 ntBASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Gm14331-201ENSMUST00000120396 409 ntBASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Gm11925-201ENSMUST00000121375 535 ntBASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Gm14383-201ENSMUST00000121637 386 ntBASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Gm22480-201ENSMUST00000122568 128 ntBASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC7.21□□□□□ -1.26
Trim11Q99PQ2 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Gm23674-201ENSMUST00000157473 131 ntBASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Gm6434-201ENSMUST00000163316 372 ntBASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Trim11Q99PQ2 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Gm19815-201ENSMUST00000175818 335 ntBASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Gm26509-201ENSMUST00000180947 948 ntBASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Gm27185-201ENSMUST00000184296 247 ntBASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC7.21□□□□□ -1.26
Trim11Q99PQ2 Gm5692-201ENSMUST00000187254 1057 ntBASIC7.21□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms