Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Lsm1Q8VC85 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
Lsm1Q8VC85 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Lsm1Q8VC85 Gm14930-201ENSMUST00000118864 652 ntBASIC5.1□□□□□ -1.59
Lsm1Q8VC85 Gm12482-201ENSMUST00000120435 630 ntBASIC5.1□□□□□ -1.59
Lsm1Q8VC85 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC5.1□□□□□ -1.59
Lsm1Q8VC85 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC5.1□□□□□ -1.59
Lsm1Q8VC85 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Lsm1Q8VC85 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Lsm1Q8VC85 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC5.1□□□□□ -1.59
Lsm1Q8VC85 Gm25348-201ENSMUST00000158961 111 ntBASIC5.1□□□□□ -1.59
Lsm1Q8VC85 Gm25445-201ENSMUST00000158996 299 ntBASIC5.1□□□□□ -1.59
Lsm1Q8VC85 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Lsm1Q8VC85 Gm25246-201ENSMUST00000175476 69 ntBASIC5.1□□□□□ -1.59
Lsm1Q8VC85 Mrgprb13-201ENSMUST00000188191 985 ntBASIC5.1□□□□□ -1.59
Lsm1Q8VC85 Gm28996-201ENSMUST00000190316 721 ntBASIC5.1□□□□□ -1.59
Lsm1Q8VC85 Gm38166-201ENSMUST00000191660 471 ntBASIC5.1□□□□□ -1.59
Lsm1Q8VC85 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Lsm1Q8VC85 Gm412-201ENSMUST00000193360 948 ntBASIC5.1□□□□□ -1.59
Lsm1Q8VC85 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.1□□□□□ -1.59
Lsm1Q8VC85 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Lsm1Q8VC85 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Lsm1Q8VC85 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Lsm1Q8VC85 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC5.1□□□□□ -1.59
Lsm1Q8VC85 CT033778.1-201ENSMUST00000224767 767 ntBASIC5.1□□□□□ -1.59
Lsm1Q8VC85 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Lsm1Q8VC85 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Lsm1Q8VC85 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Lsm1Q8VC85 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Lsm1Q8VC85 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Lsm1Q8VC85 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Lsm1Q8VC85 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Lsm1Q8VC85 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Lsm1Q8VC85 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Lsm1Q8VC85 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
Lsm1Q8VC85 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Lsm1Q8VC85 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Lsm1Q8VC85 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC5.1□□□□□ -1.59
Lsm1Q8VC85 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Lsm1Q8VC85 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Gm44894-201ENSMUST00000205280 2174 ntBASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Gm18186-201ENSMUST00000192239 1580 ntBASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Lsm1Q8VC85 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Mir292-201ENSMUST00000104847 82 ntBASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Gm11737-201ENSMUST00000118713 468 ntBASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Gm15233-201ENSMUST00000118747 400 ntBASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Gm13503-201ENSMUST00000119017 446 ntBASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Gm5383-201ENSMUST00000121177 617 ntBASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Gm13077-201ENSMUST00000121941 484 ntBASIC5.09□□□□□ -1.59
Lsm1Q8VC85 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Gm24402-201ENSMUST00000157873 91 ntBASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Gm23224-201ENSMUST00000158122 271 ntBASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Scarna13-201ENSMUST00000158164 275 ntBASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC5.09□□□□□ -1.59
Lsm1Q8VC85 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Gm27460-201ENSMUST00000184213 100 ntBASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Gm37445-201ENSMUST00000195318 242 ntBASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Mir409-201ENSMUST00000198153 79 ntBASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Gm5284-201ENSMUST00000199053 903 ntBASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Mir219c-201ENSMUST00000199860 60 ntBASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Gm44431-201ENSMUST00000203500 413 ntBASIC5.09□□□□□ -1.59
Lsm1Q8VC85 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC5.09□□□□□ -1.59
Lsm1Q8VC85 AC134439.1-201ENSMUST00000220923 600 ntBASIC5.09□□□□□ -1.59
Lsm1Q8VC85 AC134917.2-201ENSMUST00000223354 124 ntBASIC5.09□□□□□ -1.59
Lsm1Q8VC85 AC117237.1-201ENSMUST00000224035 395 ntBASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Gm7117-201ENSMUST00000071515 387 ntBASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Gm38101-201ENSMUST00000193484 3557 ntBASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Gm45177-201ENSMUST00000209104 2307 ntBASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Lsm1Q8VC85 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Lsm1Q8VC85 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.09□□□□□ -1.6
Lsm1Q8VC85 Gm37780-201ENSMUST00000194117 1873 ntBASIC5.09□□□□□ -1.6
Lsm1Q8VC85 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.09□□□□□ -1.6
Lsm1Q8VC85 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC5.09□□□□□ -1.6
Lsm1Q8VC85 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC5.09□□□□□ -1.6
Lsm1Q8VC85 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms