Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC5.36□□□□□ -1.55
Vps39Q8R5L3 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Vps39Q8R5L3 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC5.36□□□□□ -1.55
Vps39Q8R5L3 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Vps39Q8R5L3 Gm12482-201ENSMUST00000120435 630 ntBASIC5.36□□□□□ -1.55
Vps39Q8R5L3 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.36□□□□□ -1.55
Vps39Q8R5L3 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Vps39Q8R5L3 Gm25669-201ENSMUST00000157699 112 ntBASIC5.36□□□□□ -1.55
Vps39Q8R5L3 Gm25459-201ENSMUST00000157953 114 ntBASIC5.36□□□□□ -1.55
Vps39Q8R5L3 Gm24343-201ENSMUST00000158708 111 ntBASIC5.36□□□□□ -1.55
Vps39Q8R5L3 Gm25445-201ENSMUST00000158996 299 ntBASIC5.36□□□□□ -1.55
Vps39Q8R5L3 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC5.36□□□□□ -1.55
Vps39Q8R5L3 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Vps39Q8R5L3 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Vps39Q8R5L3 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Vps39Q8R5L3 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Vps39Q8R5L3 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Vps39Q8R5L3 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Vps39Q8R5L3 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Vps39Q8R5L3 Gm29376-201ENSMUST00000189357 835 ntBASIC5.36□□□□□ -1.55
Vps39Q8R5L3 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Vps39Q8R5L3 Gm43501-201ENSMUST00000202513 107 ntBASIC5.36□□□□□ -1.55
Vps39Q8R5L3 Gm44412-201ENSMUST00000203018 294 ntBASIC5.36□□□□□ -1.55
Vps39Q8R5L3 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.36□□□□□ -1.55
Vps39Q8R5L3 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Vps39Q8R5L3 AC157085.1-201ENSMUST00000216343 162 ntBASIC5.36□□□□□ -1.55
Vps39Q8R5L3 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Vps39Q8R5L3 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC5.36□□□□□ -1.55
Vps39Q8R5L3 AC134439.1-201ENSMUST00000220923 600 ntBASIC5.36□□□□□ -1.55
Vps39Q8R5L3 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC5.36□□□□□ -1.55
Vps39Q8R5L3 AC102291.1-201ENSMUST00000227164 529 ntBASIC5.36□□□□□ -1.55
Vps39Q8R5L3 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Vps39Q8R5L3 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Vps39Q8R5L3 Gm23511-201ENSMUST00000083084 164 ntBASIC5.36□□□□□ -1.55
Vps39Q8R5L3 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Vps39Q8R5L3 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Vps39Q8R5L3 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Vps39Q8R5L3 Gm44424-201ENSMUST00000203438 1826 ntBASIC5.36□□□□□ -1.55
Vps39Q8R5L3 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.36□□□□□ -1.55
Vps39Q8R5L3 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Vps39Q8R5L3 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.36□□□□□ -1.55
Vps39Q8R5L3 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Vps39Q8R5L3 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Vps39Q8R5L3 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Vps39Q8R5L3 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Gm18954-201ENSMUST00000222200 1792 ntBASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Gm8872-201ENSMUST00000197475 1341 ntBASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Gm11971-201ENSMUST00000117715 288 ntBASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Gm16420-201ENSMUST00000120258 856 ntBASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Gm6031-201ENSMUST00000121314 1054 ntBASIC5.35□□□□□ -1.55
Vps39Q8R5L3 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Gm27887-201ENSMUST00000184367 102 ntBASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Gm27636-201ENSMUST00000184528 122 ntBASIC5.35□□□□□ -1.55
Vps39Q8R5L3 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Ighv6-2-201ENSMUST00000192430 295 ntBASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Gm38015-201ENSMUST00000193048 188 ntBASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Gm43456-201ENSMUST00000202519 457 ntBASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Gm44074-201ENSMUST00000204562 337 ntBASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Gm20997-201ENSMUST00000205148 231 ntBASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Gm18541-201ENSMUST00000215935 538 ntBASIC5.35□□□□□ -1.55
Vps39Q8R5L3 AC123064.2-201ENSMUST00000217758 193 ntBASIC5.35□□□□□ -1.55
Vps39Q8R5L3 CT030030.1-201ENSMUST00000218809 152 ntBASIC5.35□□□□□ -1.55
Vps39Q8R5L3 CT033778.1-201ENSMUST00000224767 767 ntBASIC5.35□□□□□ -1.55
Vps39Q8R5L3 AV026068-224ENSMUST00000224827 928 ntBASIC5.35□□□□□ -1.55
Vps39Q8R5L3 AC165260.4-201ENSMUST00000225924 724 ntBASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Gm16335-201ENSMUST00000077495 309 ntBASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC5.35□□□□□ -1.55
Vps39Q8R5L3 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Vps39Q8R5L3 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.35□□□□□ -1.55
Vps39Q8R5L3 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.34□□□□□ -1.55
Vps39Q8R5L3 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Vps39Q8R5L3 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Vps39Q8R5L3 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Vps39Q8R5L3 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
Vps39Q8R5L3 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Vps39Q8R5L3 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.34□□□□□ -1.55
Vps39Q8R5L3 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC5.34□□□□□ -1.55
Vps39Q8R5L3 Smc5-206ENSMUST00000226111 3265 ntBASIC5.34□□□□□ -1.55
Vps39Q8R5L3 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms