Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Gm18719-201ENSMUST00000196696 1413 ntBASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc28bQ8CEG5 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 BC055308-201ENSMUST00000193380 2538 ntBASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 Gm11105-201ENSMUST00000112781 478 ntBASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 Gm11908-201ENSMUST00000117755 347 ntBASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 Gm5133-201ENSMUST00000118940 1255 ntBASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 Gm24382-201ENSMUST00000122698 107 ntBASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 Gm6542-201ENSMUST00000153606 772 ntBASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 Gm22764-201ENSMUST00000158370 92 ntBASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 Gm21772-201ENSMUST00000169213 478 ntBASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 Gm17126-201ENSMUST00000172276 523 ntBASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 Gm18343-201ENSMUST00000172802 604 ntBASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 Gm18808-201ENSMUST00000173316 462 ntBASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 Gm22932-201ENSMUST00000175510 72 ntBASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 Gm18595-201ENSMUST00000175736 1068 ntBASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 Gm28507-201ENSMUST00000189737 703 ntBASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 Gm18702-201ENSMUST00000196923 588 ntBASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 Gm42464-202ENSMUST00000198111 774 ntBASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 Gm44768-201ENSMUST00000205719 393 ntBASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 Gm18592-201ENSMUST00000221529 276 ntBASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 AC154636.1-201ENSMUST00000223226 126 ntBASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 AC102291.1-201ENSMUST00000227164 529 ntBASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ccdc28bQ8CEG5 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.21□□□□□ -1.57
Ccdc28bQ8CEG5 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5.21□□□□□ -1.57
Ccdc28bQ8CEG5 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Ccdc28bQ8CEG5 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Ccdc28bQ8CEG5 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
Ccdc28bQ8CEG5 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Ccdc28bQ8CEG5 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Gm9005-201ENSMUST00000119908 607 ntBASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Gm12307-201ENSMUST00000120581 590 ntBASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Gm11278-201ENSMUST00000121002 997 ntBASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Gm26346-201ENSMUST00000157525 329 ntBASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Gm17366-201ENSMUST00000167629 187 ntBASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Gm27512-201ENSMUST00000175328 126 ntBASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Gm2058-201ENSMUST00000178791 560 ntBASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Gm27219-201ENSMUST00000184633 742 ntBASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Gm21877-201ENSMUST00000185640 694 ntBASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Gm18985-201ENSMUST00000196472 1079 ntBASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Ighv1-73-201ENSMUST00000197435 352 ntBASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Gm44312-201ENSMUST00000203536 469 ntBASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Gm44607-201ENSMUST00000205611 1090 ntBASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Gm18587-201ENSMUST00000213736 841 ntBASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 AC174082.2-201ENSMUST00000222094 543 ntBASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Zfp429-203ENSMUST00000224684 524 ntBASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Nsa2-203ENSMUST00000225410 974 ntBASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 AC151902.1-201ENSMUST00000227800 375 ntBASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Olfr878-201ENSMUST00000086061 1065 ntBASIC5.21□□□□□ -1.58
Ccdc28bQ8CEG5 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 137.5 ms