Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC6.09□□□□□ -1.43
Trim9Q8C7M3 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim9Q8C7M3 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Trim9Q8C7M3 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim9Q8C7M3 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Trim9Q8C7M3 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Trim9Q8C7M3 Gm1972-201ENSMUST00000181606 964 ntBASIC6.09□□□□□ -1.43
Trim9Q8C7M3 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC6.09□□□□□ -1.43
Trim9Q8C7M3 Gm27754-201ENSMUST00000183340 126 ntBASIC6.09□□□□□ -1.43
Trim9Q8C7M3 Gm36974-201ENSMUST00000194200 1071 ntBASIC6.09□□□□□ -1.43
Trim9Q8C7M3 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim9Q8C7M3 Mir219c-201ENSMUST00000199860 60 ntBASIC6.09□□□□□ -1.43
Trim9Q8C7M3 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC6.09□□□□□ -1.43
Trim9Q8C7M3 Gm17988-201ENSMUST00000208796 535 ntBASIC6.09□□□□□ -1.43
Trim9Q8C7M3 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC6.09□□□□□ -1.43
Trim9Q8C7M3 Gm18705-201ENSMUST00000215985 913 ntBASIC6.09□□□□□ -1.43
Trim9Q8C7M3 Gm8137-201ENSMUST00000218997 463 ntBASIC6.09□□□□□ -1.43
Trim9Q8C7M3 AC134439.1-201ENSMUST00000220923 600 ntBASIC6.09□□□□□ -1.43
Trim9Q8C7M3 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC6.09□□□□□ -1.43
Trim9Q8C7M3 AC154484.1-201ENSMUST00000227311 771 ntBASIC6.09□□□□□ -1.43
Trim9Q8C7M3 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim9Q8C7M3 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Trim9Q8C7M3 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim9Q8C7M3 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC6.09□□□□□ -1.43
Trim9Q8C7M3 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim9Q8C7M3 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Trim9Q8C7M3 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Trim9Q8C7M3 Gm42600-201ENSMUST00000202081 3588 ntBASIC6.09□□□□□ -1.43
Trim9Q8C7M3 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Trim9Q8C7M3 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.09□□□□□ -1.43
Trim9Q8C7M3 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Trim9Q8C7M3 Gm42455-201ENSMUST00000199761 2736 ntBASIC6.09□□□□□ -1.43
Trim9Q8C7M3 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Trim9Q8C7M3 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Trim9Q8C7M3 Gm42676-201ENSMUST00000197609 2686 ntBASIC6.09□□□□□ -1.44
Trim9Q8C7M3 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Trim9Q8C7M3 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC6.09□□□□□ -1.44
Trim9Q8C7M3 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Gm44676-201ENSMUST00000208520 3055 ntBASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Gm4973-201ENSMUST00000206925 1334 ntBASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Gm11737-201ENSMUST00000118713 468 ntBASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Gm4853-201ENSMUST00000119359 394 ntBASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Gm11389-201ENSMUST00000121407 430 ntBASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Gm15057-201ENSMUST00000121516 534 ntBASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Gm12110-201ENSMUST00000121601 579 ntBASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Gm16260-201ENSMUST00000155141 304 ntBASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Mir5110-201ENSMUST00000175537 87 ntBASIC6.08□□□□□ -1.44
Trim9Q8C7M3 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Gm7266-201ENSMUST00000187999 405 ntBASIC6.08□□□□□ -1.44
Trim9Q8C7M3 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Gm37308-201ENSMUST00000194684 100 ntBASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Ighv1-44-201ENSMUST00000195597 352 ntBASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Gm42522-201ENSMUST00000196071 255 ntBASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC6.08□□□□□ -1.44
Trim9Q8C7M3 n-TStga1-201ENSMUST00000199903 109 ntBASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 AC122901.2-201ENSMUST00000216926 285 ntBASIC6.08□□□□□ -1.44
Trim9Q8C7M3 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC6.08□□□□□ -1.44
Trim9Q8C7M3 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 AC134254.2-201ENSMUST00000221262 170 ntBASIC6.08□□□□□ -1.44
Trim9Q8C7M3 AC156576.2-202ENSMUST00000222525 411 ntBASIC6.08□□□□□ -1.44
Trim9Q8C7M3 AC173482.2-201ENSMUST00000224044 750 ntBASIC6.08□□□□□ -1.44
Trim9Q8C7M3 CT030194.2-201ENSMUST00000225752 379 ntBASIC6.08□□□□□ -1.44
Trim9Q8C7M3 AC124408.2-201ENSMUST00000228168 645 ntBASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Snora30-201ENSMUST00000083325 130 ntBASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Gm43771-201ENSMUST00000202931 1578 ntBASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim9Q8C7M3 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms