Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm43309-201ENSMUST00000200837 458 ntBASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Gm5215-201ENSMUST00000054380 405 ntBASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Gm38351-201ENSMUST00000195466 2518 ntBASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Mir546-201ENSMUST00000102105 121 ntBASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Gm11561-201ENSMUST00000117429 417 ntBASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Gm12328-201ENSMUST00000118611 197 ntBASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Gm15075-201ENSMUST00000122187 477 ntBASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Gm16250-201ENSMUST00000148974 256 ntBASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Gm16571-201ENSMUST00000159112 291 ntBASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Gm32526-201ENSMUST00000221878 981 ntBASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC4.7□□□□□ -1.66
Col6a6Q8C6K9 Fam35a-206ENSMUST00000228626 3100 ntBASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 Gm6717-201ENSMUST00000185549 838 ntBASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 Gm44248-201ENSMUST00000203079 1549 ntBASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 Gm37400-201ENSMUST00000193148 3605 ntBASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 Gm42998-201ENSMUST00000197053 2371 ntBASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 Gm17101-201ENSMUST00000169520 1588 ntBASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 AC124414.1-201ENSMUST00000218033 2946 ntBASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 Gm4832-201ENSMUST00000182679 399 ntBASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 Gm27492-201ENSMUST00000185194 187 ntBASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 Gm29240-201ENSMUST00000187248 286 ntBASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 Gm5252-201ENSMUST00000189030 909 ntBASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 AC159886.1-201ENSMUST00000217099 1091 ntBASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Col6a6Q8C6K9 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 Gm14245-201ENSMUST00000118939 1843 ntBASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 Gm29084-201ENSMUST00000185587 1452 ntBASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 Gm13452-201ENSMUST00000120896 1097 ntBASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 Gm25103-201ENSMUST00000122671 318 ntBASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 Gm23171-201ENSMUST00000157159 264 ntBASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 Gm22367-201ENSMUST00000178930 132 ntBASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 Gm21856-201ENSMUST00000187547 696 ntBASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 Gm28769-201ENSMUST00000190176 615 ntBASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 Gm42459-201ENSMUST00000199679 742 ntBASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC4.68□□□□□ -1.66
Col6a6Q8C6K9 AC164597.1-201ENSMUST00000226538 514 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 134.3 ms