Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Heatr9-201ENSMUST00000019069 1875 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Trim35Q8C006 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim35Q8C006 BC049715-203ENSMUST00000203499 2057 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Trim35Q8C006 Gm28469-201ENSMUST00000186374 2166 ntTSL 5 BASIC8.42□□□□□ -1.06
Trim35Q8C006 Gm28352-201ENSMUST00000186654 2167 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim35Q8C006 Gm28972-201ENSMUST00000186990 2167 ntTSL 5 BASIC8.42□□□□□ -1.06
Trim35Q8C006 Gm28866-201ENSMUST00000187298 2167 ntTSL 5 BASIC8.42□□□□□ -1.06
Trim35Q8C006 Gm28823-201ENSMUST00000188540 2167 ntTSL 5 BASIC8.42□□□□□ -1.06
Trim35Q8C006 Gm28134-201ENSMUST00000188690 2166 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim35Q8C006 Gm28346-201ENSMUST00000189021 2167 ntTSL 5 BASIC8.42□□□□□ -1.06
Trim35Q8C006 Gm37574-201ENSMUST00000194264 2166 ntTSL 5 BASIC8.42□□□□□ -1.06
Trim35Q8C006 Gm43429-201ENSMUST00000197889 2251 ntBASIC8.42□□□□□ -1.06
Trim35Q8C006 Zfp148-201ENSMUST00000089677 4032 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim35Q8C006 Aldh7a1-208ENSMUST00000174518 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim35Q8C006 Cyld-203ENSMUST00000109626 7945 ntAPPRIS P3 TSL 5 BASIC8.42□□□□□ -1.06
Trim35Q8C006 Vmn1r26-203ENSMUST00000228070 4419 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Trim35Q8C006 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Trim35Q8C006 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Trim35Q8C006 Slc5a6-206ENSMUST00000202556 3078 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Trim35Q8C006 Dgkh-206ENSMUST00000228362 3308 ntBASIC8.42□□□□□ -1.06
Trim35Q8C006 Gm44104-201ENSMUST00000204736 3777 ntBASIC8.42□□□□□ -1.06
Trim35Q8C006 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Trim35Q8C006 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim35Q8C006 Obp2b-201ENSMUST00000114192 732 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Trim35Q8C006 Gm14359-201ENSMUST00000118883 424 ntBASIC8.42□□□□□ -1.06
Trim35Q8C006 Gm6136-201ENSMUST00000120149 891 ntBASIC8.42□□□□□ -1.06
Trim35Q8C006 Gm22598-201ENSMUST00000157600 127 ntBASIC8.42□□□□□ -1.06
Trim35Q8C006 Gm23497-201ENSMUST00000157738 130 ntBASIC8.42□□□□□ -1.06
Trim35Q8C006 Gm25551-201ENSMUST00000158082 103 ntBASIC8.42□□□□□ -1.06
Trim35Q8C006 Gm3141-201ENSMUST00000168726 499 ntBASIC8.42□□□□□ -1.06
Trim35Q8C006 Gm7191-201ENSMUST00000182678 990 ntBASIC8.42□□□□□ -1.06
Trim35Q8C006 Gm29657-201ENSMUST00000189807 342 ntBASIC8.42□□□□□ -1.06
Trim35Q8C006 Igkv4-65-201ENSMUST00000196986 358 ntBASIC8.42□□□□□ -1.06
Trim35Q8C006 Gm43797-201ENSMUST00000198221 532 ntBASIC8.42□□□□□ -1.06
Trim35Q8C006 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC8.42□□□□□ -1.06
Trim35Q8C006 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC8.42□□□□□ -1.06
Trim35Q8C006 Gm44932-201ENSMUST00000206799 121 ntBASIC8.42□□□□□ -1.06
Trim35Q8C006 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC8.42□□□□□ -1.06
Trim35Q8C006 AC154527.5-201ENSMUST00000224448 496 ntBASIC8.42□□□□□ -1.06
Trim35Q8C006 AC133910.1-201ENSMUST00000228128 624 ntBASIC8.42□□□□□ -1.06
Trim35Q8C006 Ppp2r3a-202ENSMUST00000075941 6786 ntTSL 5 BASIC8.42□□□□□ -1.06
Trim35Q8C006 L3mbtl3-202ENSMUST00000105519 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim35Q8C006 Cct7-203ENSMUST00000204592 1544 ntTSL 5 BASIC8.42□□□□□ -1.06
Trim35Q8C006 Rpusd1-201ENSMUST00000047273 1703 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim35Q8C006 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC8.42□□□□□ -1.06
Trim35Q8C006 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC8.42□□□□□ -1.06
Trim35Q8C006 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC8.42□□□□□ -1.06
Trim35Q8C006 Gm31182-201ENSMUST00000219061 2391 ntTSL 5 BASIC8.42□□□□□ -1.06
Trim35Q8C006 Gm10743-201ENSMUST00000219611 2358 ntBASIC8.42□□□□□ -1.06
Trim35Q8C006 Gm5120-201ENSMUST00000215231 2414 ntBASIC8.42□□□□□ -1.06
Trim35Q8C006 Gm37121-201ENSMUST00000192219 2556 ntBASIC8.42□□□□□ -1.06
Trim35Q8C006 Rpl7l1-201ENSMUST00000078286 2606 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim35Q8C006 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim35Q8C006 Gm3854-201ENSMUST00000207173 2950 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Trim35Q8C006 Pkia-201ENSMUST00000028999 3617 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim35Q8C006 Osbpl6-203ENSMUST00000111930 3853 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim35Q8C006 Csmd2-205ENSMUST00000184063 13555 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Trim35Q8C006 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim35Q8C006 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim35Q8C006 Cdc40-201ENSMUST00000044166 3534 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim35Q8C006 Cblb-205ENSMUST00000227756 3378 ntBASIC8.41□□□□□ -1.06
Trim35Q8C006 Palb2-203ENSMUST00000106468 3304 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim35Q8C006 Smpd4-209ENSMUST00000165363 3046 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim35Q8C006 Epha7-202ENSMUST00000080934 2880 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim35Q8C006 Gm13571-202ENSMUST00000151984 2127 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim35Q8C006 Btbd16-204ENSMUST00000208593 1849 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Trim35Q8C006 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC8.41□□□□□ -1.06
Trim35Q8C006 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim35Q8C006 Teddm1a-201ENSMUST00000050660 1317 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Trim35Q8C006 Sycn-201ENSMUST00000119180 556 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim35Q8C006 Gm14846-201ENSMUST00000121868 216 ntBASIC8.41□□□□□ -1.06
Trim35Q8C006 n-R5s43-201ENSMUST00000122739 110 ntBASIC8.41□□□□□ -1.06
Trim35Q8C006 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC8.41□□□□□ -1.06
Trim35Q8C006 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC8.41□□□□□ -1.06
Trim35Q8C006 Gm23644-201ENSMUST00000157856 77 ntBASIC8.41□□□□□ -1.06
Trim35Q8C006 Gm23817-201ENSMUST00000158449 104 ntBASIC8.41□□□□□ -1.06
Trim35Q8C006 Gm17052-201ENSMUST00000165496 289 ntBASIC8.41□□□□□ -1.06
Trim35Q8C006 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC8.41□□□□□ -1.06
Trim35Q8C006 Gm20451-201ENSMUST00000173452 273 ntBASIC8.41□□□□□ -1.06
Trim35Q8C006 Mir466b-1-201ENSMUST00000177988 82 ntBASIC8.41□□□□□ -1.06
Trim35Q8C006 Gm28723-201ENSMUST00000188640 1001 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim35Q8C006 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC8.41□□□□□ -1.06
Trim35Q8C006 Gm6693-201ENSMUST00000189583 813 ntBASIC8.41□□□□□ -1.06
Trim35Q8C006 Gm37878-201ENSMUST00000192108 387 ntBASIC8.41□□□□□ -1.06
Trim35Q8C006 Gm42566-201ENSMUST00000197120 643 ntBASIC8.41□□□□□ -1.06
Trim35Q8C006 AC150901.1-201ENSMUST00000208407 145 ntBASIC8.41□□□□□ -1.06
Trim35Q8C006 AC125531.1-201ENSMUST00000219849 221 ntBASIC8.41□□□□□ -1.06
Trim35Q8C006 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC8.41□□□□□ -1.06
Trim35Q8C006 AC161609.1-201ENSMUST00000225878 474 ntBASIC8.41□□□□□ -1.06
Trim35Q8C006 AC101831.1-201ENSMUST00000228245 691 ntBASIC8.41□□□□□ -1.06
Trim35Q8C006 1700001C02Rik-201ENSMUST00000031078 731 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim35Q8C006 Churc1-201ENSMUST00000041262 676 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim35Q8C006 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim35Q8C006 Dnajc28-204ENSMUST00000169982 3535 ntAPPRIS P4 TSL 2 BASIC8.41□□□□□ -1.06
Trim35Q8C006 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim35Q8C006 Tbc1d8b-201ENSMUST00000096313 5094 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim35Q8C006 Zkscan7-201ENSMUST00000063980 4722 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim35Q8C006 Gm42598-201ENSMUST00000200110 2437 ntBASIC8.41□□□□□ -1.06
Trim35Q8C006 Sap130-201ENSMUST00000025109 4015 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim35Q8C006 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 137.1 ms