Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm16125-201ENSMUST00000159003 339 ntBASIC7.34□□□□□ -1.23
Usp47Q8BY87 Mir7012-201ENSMUST00000183900 64 ntBASIC7.34□□□□□ -1.23
Usp47Q8BY87 Gm2147-201ENSMUST00000193588 639 ntBASIC7.34□□□□□ -1.23
Usp47Q8BY87 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC7.34□□□□□ -1.23
Usp47Q8BY87 Gm5373-201ENSMUST00000212113 1050 ntBASIC7.34□□□□□ -1.23
Usp47Q8BY87 CT030238.1-201ENSMUST00000228393 442 ntBASIC7.34□□□□□ -1.23
Usp47Q8BY87 Gm16415-201ENSMUST00000080097 489 ntBASIC7.34□□□□□ -1.23
Usp47Q8BY87 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Usp47Q8BY87 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC7.34□□□□□ -1.23
Usp47Q8BY87 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Usp47Q8BY87 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Usp47Q8BY87 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Usp47Q8BY87 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Usp47Q8BY87 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
Usp47Q8BY87 Gm37509-201ENSMUST00000194867 3169 ntBASIC7.34□□□□□ -1.23
Usp47Q8BY87 Gm37940-201ENSMUST00000194243 3251 ntBASIC7.34□□□□□ -1.23
Usp47Q8BY87 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Usp47Q8BY87 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Usp47Q8BY87 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp47Q8BY87 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
Usp47Q8BY87 Gm12131-201ENSMUST00000117479 359 ntBASIC7.33□□□□□ -1.24
Usp47Q8BY87 Gm12641-201ENSMUST00000117874 985 ntBASIC7.33□□□□□ -1.24
Usp47Q8BY87 Gm11909-201ENSMUST00000121424 759 ntBASIC7.33□□□□□ -1.24
Usp47Q8BY87 Gm25293-201ENSMUST00000122792 285 ntBASIC7.33□□□□□ -1.24
Usp47Q8BY87 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC7.33□□□□□ -1.24
Usp47Q8BY87 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Usp47Q8BY87 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Usp47Q8BY87 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC7.33□□□□□ -1.24
Usp47Q8BY87 Gm10048-201ENSMUST00000194196 372 ntBASIC7.33□□□□□ -1.24
Usp47Q8BY87 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC7.33□□□□□ -1.24
Usp47Q8BY87 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC7.33□□□□□ -1.24
Usp47Q8BY87 AC117240.2-201ENSMUST00000220921 263 ntBASIC7.33□□□□□ -1.24
Usp47Q8BY87 Gm9512-201ENSMUST00000223112 497 ntBASIC7.33□□□□□ -1.24
Usp47Q8BY87 Gm7040-201ENSMUST00000223271 443 ntBASIC7.33□□□□□ -1.24
Usp47Q8BY87 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC7.33□□□□□ -1.24
Usp47Q8BY87 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp47Q8BY87 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Usp47Q8BY87 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
Usp47Q8BY87 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp47Q8BY87 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp47Q8BY87 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp47Q8BY87 Gm43523-201ENSMUST00000197397 2878 ntBASIC7.33□□□□□ -1.24
Usp47Q8BY87 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC7.33□□□□□ -1.24
Usp47Q8BY87 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC7.33□□□□□ -1.24
Usp47Q8BY87 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC7.33□□□□□ -1.24
Usp47Q8BY87 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp47Q8BY87 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC7.33□□□□□ -1.24
Usp47Q8BY87 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Usp47Q8BY87 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Usp47Q8BY87 Gm15480-201ENSMUST00000120442 519 ntBASIC7.33□□□□□ -1.24
Usp47Q8BY87 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Usp47Q8BY87 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC7.33□□□□□ -1.24
Usp47Q8BY87 Mir6963-201ENSMUST00000183535 71 ntBASIC7.33□□□□□ -1.24
Usp47Q8BY87 Gm28468-201ENSMUST00000188536 615 ntBASIC7.33□□□□□ -1.24
Usp47Q8BY87 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp47Q8BY87 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC7.33□□□□□ -1.24
Usp47Q8BY87 Gm38360-201ENSMUST00000195130 454 ntBASIC7.33□□□□□ -1.24
Usp47Q8BY87 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC7.33□□□□□ -1.24
Usp47Q8BY87 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Usp47Q8BY87 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Usp47Q8BY87 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC7.32□□□□□ -1.24
Usp47Q8BY87 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Usp47Q8BY87 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
Usp47Q8BY87 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Usp47Q8BY87 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC7.32□□□□□ -1.24
Usp47Q8BY87 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Usp47Q8BY87 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC7.32□□□□□ -1.24
Usp47Q8BY87 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Usp47Q8BY87 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Usp47Q8BY87 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Usp47Q8BY87 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Usp47Q8BY87 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Usp47Q8BY87 Gm5844-201ENSMUST00000119417 2191 ntBASIC7.32□□□□□ -1.24
Usp47Q8BY87 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
Usp47Q8BY87 Gm14995-201ENSMUST00000117135 391 ntBASIC7.32□□□□□ -1.24
Usp47Q8BY87 Gm15971-201ENSMUST00000119372 211 ntBASIC7.32□□□□□ -1.24
Usp47Q8BY87 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC7.32□□□□□ -1.24
Usp47Q8BY87 Gm13506-201ENSMUST00000120391 1083 ntBASIC7.32□□□□□ -1.24
Usp47Q8BY87 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC7.32□□□□□ -1.24
Usp47Q8BY87 Gm15227-201ENSMUST00000121844 399 ntBASIC7.32□□□□□ -1.24
Usp47Q8BY87 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC7.32□□□□□ -1.24
Usp47Q8BY87 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC7.32□□□□□ -1.24
Usp47Q8BY87 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC7.32□□□□□ -1.24
Usp47Q8BY87 Gm25534-201ENSMUST00000175365 125 ntBASIC7.32□□□□□ -1.24
Usp47Q8BY87 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC7.32□□□□□ -1.24
Usp47Q8BY87 AC154305.3-201ENSMUST00000224661 552 ntBASIC7.32□□□□□ -1.24
Usp47Q8BY87 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Usp47Q8BY87 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Usp47Q8BY87 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Usp47Q8BY87 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Usp47Q8BY87 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Usp47Q8BY87 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Usp47Q8BY87 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Usp47Q8BY87 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Usp47Q8BY87 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Usp47Q8BY87 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Usp47Q8BY87 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Usp47Q8BY87 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Usp47Q8BY87 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Usp47Q8BY87 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC7.31□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms