Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Gm37789-201ENSMUST00000192862 2889 ntBASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc40Q8BI79 Gm37762-201ENSMUST00000194515 3561 ntBASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 Gm16200-201ENSMUST00000120385 331 ntBASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 Mir6374-201ENSMUST00000184003 107 ntBASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 Gm29474-201ENSMUST00000187688 379 ntBASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 Gm37308-201ENSMUST00000194684 100 ntBASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 Gm4874-201ENSMUST00000203589 691 ntBASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 Gm2961-201ENSMUST00000211074 772 ntBASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 AC158633.1-201ENSMUST00000219892 649 ntBASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 AC155922.1-201ENSMUST00000220100 373 ntBASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Ccdc40Q8BI79 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 Gm45555-201ENSMUST00000210028 2602 ntBASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 Gm43162-201ENSMUST00000198292 1770 ntBASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 Gm13321-201ENSMUST00000117101 400 ntBASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 Gm6047-201ENSMUST00000167221 574 ntBASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 Gm1972-201ENSMUST00000181606 964 ntBASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 Igkv4-75-201ENSMUST00000197204 359 ntBASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 Gm7733-201ENSMUST00000199038 919 ntBASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 Gm44580-201ENSMUST00000206333 877 ntBASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 CU024910.1-201ENSMUST00000214310 418 ntBASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 AC154636.1-201ENSMUST00000223226 126 ntBASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 CT025523.1-201ENSMUST00000228318 694 ntBASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 Gm25134-201ENSMUST00000082646 160 ntBASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 AC132852.1-201ENSMUST00000214683 2324 ntBASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Ccdc40Q8BI79 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc40Q8BI79 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.65□□□□□ -1.5
Ccdc40Q8BI79 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Ccdc40Q8BI79 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc40Q8BI79 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc40Q8BI79 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.65□□□□□ -1.5
Ccdc40Q8BI79 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Ccdc40Q8BI79 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Ccdc40Q8BI79 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Ccdc40Q8BI79 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
Ccdc40Q8BI79 Gm14620-201ENSMUST00000120656 383 ntBASIC5.65□□□□□ -1.5
Ccdc40Q8BI79 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.65□□□□□ -1.5
Ccdc40Q8BI79 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC5.65□□□□□ -1.5
Ccdc40Q8BI79 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc40Q8BI79 Gm26372-201ENSMUST00000157831 236 ntBASIC5.65□□□□□ -1.5
Ccdc40Q8BI79 Gm25459-201ENSMUST00000157953 114 ntBASIC5.65□□□□□ -1.5
Ccdc40Q8BI79 Gm7281-201ENSMUST00000160010 543 ntBASIC5.65□□□□□ -1.5
Ccdc40Q8BI79 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc40Q8BI79 Mir7082-201ENSMUST00000183526 92 ntBASIC5.65□□□□□ -1.5
Ccdc40Q8BI79 Gm37741-201ENSMUST00000191768 1256 ntBASIC5.65□□□□□ -1.5
Ccdc40Q8BI79 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.65□□□□□ -1.5
Ccdc40Q8BI79 Gm8826-201ENSMUST00000193161 948 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 151 ms