Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Nup98Q6PFD9 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Nup98Q6PFD9 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
Nup98Q6PFD9 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Nup98Q6PFD9 Gm24170-201ENSMUST00000104124 133 ntBASIC6.07□□□□□ -1.44
Nup98Q6PFD9 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Nup98Q6PFD9 Gm11910-201ENSMUST00000121624 432 ntBASIC6.07□□□□□ -1.44
Nup98Q6PFD9 Gm26034-201ENSMUST00000158154 116 ntBASIC6.07□□□□□ -1.44
Nup98Q6PFD9 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Nup98Q6PFD9 Gm37961-201ENSMUST00000192729 299 ntBASIC6.07□□□□□ -1.44
Nup98Q6PFD9 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC6.07□□□□□ -1.44
Nup98Q6PFD9 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC6.07□□□□□ -1.44
Nup98Q6PFD9 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Nup98Q6PFD9 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Nup98Q6PFD9 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Nup98Q6PFD9 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Nup98Q6PFD9 Gm37400-201ENSMUST00000193148 3605 ntBASIC6.07□□□□□ -1.44
Nup98Q6PFD9 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC6.07□□□□□ -1.44
Nup98Q6PFD9 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Nup98Q6PFD9 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Nup98Q6PFD9 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC6.07□□□□□ -1.44
Nup98Q6PFD9 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Nup98Q6PFD9 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Gm13033-201ENSMUST00000117591 1057 ntBASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Gm10087-201ENSMUST00000167650 330 ntBASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Gm27690-201ENSMUST00000184596 126 ntBASIC6.06□□□□□ -1.44
Nup98Q6PFD9 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Gm28567-201ENSMUST00000190270 693 ntBASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Gm37044-201ENSMUST00000193531 693 ntBASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Gm38369-201ENSMUST00000195101 693 ntBASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Gm20940-201ENSMUST00000197308 360 ntBASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Gm43418-201ENSMUST00000201334 428 ntBASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Gm18791-201ENSMUST00000204611 726 ntBASIC6.06□□□□□ -1.44
Nup98Q6PFD9 CT030124.1-201ENSMUST00000217130 235 ntBASIC6.06□□□□□ -1.44
Nup98Q6PFD9 AC125399.1-201ENSMUST00000224236 595 ntBASIC6.06□□□□□ -1.44
Nup98Q6PFD9 AC154840.1-201ENSMUST00000225216 408 ntBASIC6.06□□□□□ -1.44
Nup98Q6PFD9 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Nup98Q6PFD9 AC139754.2-201ENSMUST00000218037 1455 ntBASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Gm37509-201ENSMUST00000194867 3169 ntBASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Gm44668-201ENSMUST00000207911 3265 ntBASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Gm37217-201ENSMUST00000194017 3521 ntBASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Gm23948-201ENSMUST00000104030 132 ntBASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
Nup98Q6PFD9 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Nup98Q6PFD9 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Gm3362-201ENSMUST00000148102 466 ntBASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC6.06□□□□□ -1.44
Nup98Q6PFD9 V1rg10-201ENSMUST00000183378 937 ntBASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Gm27820-201ENSMUST00000183628 175 ntBASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Gm27492-201ENSMUST00000185194 187 ntBASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Gm9687-201ENSMUST00000189312 602 ntBASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Gm3148-201ENSMUST00000203594 612 ntBASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Gm8999-201ENSMUST00000204951 969 ntBASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Gm20586-201ENSMUST00000210122 547 ntBASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Gm8264-201ENSMUST00000217801 465 ntBASIC6.06□□□□□ -1.44
Nup98Q6PFD9 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Gm8158-201ENSMUST00000219220 465 ntBASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Gm8112-201ENSMUST00000219637 465 ntBASIC6.06□□□□□ -1.44
Nup98Q6PFD9 CT030159.1-201ENSMUST00000221580 2261 ntBASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Ap3m1-208ENSMUST00000224016 764 ntBASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Nup98Q6PFD9 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Nup98Q6PFD9 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Nup98Q6PFD9 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nup98Q6PFD9 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nup98Q6PFD9 Gm42681-201ENSMUST00000197999 1611 ntBASIC6.05□□□□□ -1.44
Nup98Q6PFD9 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Nup98Q6PFD9 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nup98Q6PFD9 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nup98Q6PFD9 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nup98Q6PFD9 Gm15297-201ENSMUST00000117795 290 ntBASIC6.05□□□□□ -1.44
Nup98Q6PFD9 Gm13503-201ENSMUST00000119017 446 ntBASIC6.05□□□□□ -1.44
Nup98Q6PFD9 Gm11822-201ENSMUST00000119177 415 ntBASIC6.05□□□□□ -1.44
Nup98Q6PFD9 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC6.05□□□□□ -1.44
Nup98Q6PFD9 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC6.05□□□□□ -1.44
Nup98Q6PFD9 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nup98Q6PFD9 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC6.05□□□□□ -1.44
Nup98Q6PFD9 Gm5244-202ENSMUST00000189517 743 ntBASIC6.05□□□□□ -1.44
Nup98Q6PFD9 Gm28957-201ENSMUST00000190174 373 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms