Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm25785-201ENSMUST00000104129 125 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm25724-201ENSMUST00000104531 117 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm12842-201ENSMUST00000117298 476 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm12370-201ENSMUST00000117809 604 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm13473-201ENSMUST00000119289 367 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm12578-201ENSMUST00000121244 417 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm14613-201ENSMUST00000122239 752 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Mir1903-201ENSMUST00000122574 80 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm24781-201ENSMUST00000157636 117 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm23591-201ENSMUST00000157663 286 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm22428-201ENSMUST00000158554 132 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm15914-201ENSMUST00000161922 309 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm7316-201ENSMUST00000165395 445 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm28560-201ENSMUST00000186091 315 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm28334-201ENSMUST00000186653 315 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm28495-201ENSMUST00000188452 315 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm28232-201ENSMUST00000188683 315 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm28481-201ENSMUST00000189231 315 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm29059-201ENSMUST00000191534 315 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm37765-201ENSMUST00000192395 315 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm37237-201ENSMUST00000192893 315 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm36968-201ENSMUST00000193737 315 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm38290-201ENSMUST00000195238 315 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm5711-201ENSMUST00000197896 421 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm43089-201ENSMUST00000199162 275 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm7463-201ENSMUST00000201541 547 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm44225-201ENSMUST00000203582 186 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm21041-201ENSMUST00000214829 823 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 AC162376.1-201ENSMUST00000220120 435 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm18620-201ENSMUST00000222295 324 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 AC154576.2-203ENSMUST00000224736 253 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 CT025602.1-201ENSMUST00000227281 382 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 CT025548.1-201ENSMUST00000227459 257 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm5321-201ENSMUST00000072050 447 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm24921-201ENSMUST00000083024 107 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC6.52□□□□□ -1.36
Sh3rf1Q69ZI1 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Gm38081-201ENSMUST00000192680 1645 ntBASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Gm26340-201ENSMUST00000102365 99 ntBASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Gm22267-201ENSMUST00000104008 131 ntBASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Gm12189-201ENSMUST00000119779 912 ntBASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Gm14331-201ENSMUST00000120396 409 ntBASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Gm15111-201ENSMUST00000122142 878 ntBASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Gm23885-201ENSMUST00000122682 294 ntBASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Gm24628-201ENSMUST00000122761 289 ntBASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Mup-ps12-201ENSMUST00000126217 549 ntBASIC6.52□□□□□ -1.37
Sh3rf1Q69ZI1 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms