Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Gm13367-201ENSMUST00000119955 796 ntBASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Gm22106-201ENSMUST00000122544 127 ntBASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Gm21990-201ENSMUST00000124692 383 ntBASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Gm23250-201ENSMUST00000157444 267 ntBASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Gm24465-201ENSMUST00000178398 107 ntBASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Gm7496-201ENSMUST00000192573 1034 ntBASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Gm42452-201ENSMUST00000199749 617 ntBASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Gm6850-201ENSMUST00000210031 530 ntBASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Gm9269-201ENSMUST00000221661 578 ntBASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 AL807824.1-201ENSMUST00000223151 183 ntBASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Gm18186-201ENSMUST00000192239 1580 ntBASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 Gm11743-201ENSMUST00000117385 1735 ntBASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 Gm8424-201ENSMUST00000117716 988 ntBASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 Gm15531-201ENSMUST00000118062 252 ntBASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 Gm14601-201ENSMUST00000120892 236 ntBASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 Gm5401-201ENSMUST00000122444 365 ntBASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 n-R5s98-201ENSMUST00000122549 119 ntBASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 Gm10087-201ENSMUST00000167650 330 ntBASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 Gm23617-201ENSMUST00000175410 95 ntBASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 Gm8719-201ENSMUST00000203602 534 ntBASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 Gm29781-201ENSMUST00000203862 478 ntBASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 AC112956.1-201ENSMUST00000213563 492 ntBASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 Gm7529-201ENSMUST00000213753 1897 ntBASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 Gm6056-201ENSMUST00000221253 488 ntBASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 Gm36501-201ENSMUST00000221857 745 ntBASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 AC134439.2-201ENSMUST00000221950 467 ntBASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 AC154368.2-201ENSMUST00000222334 1724 ntBASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 AC165953.1-201ENSMUST00000226386 357 ntBASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Upf3bQ3ULL6 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Gm13928-201ENSMUST00000120326 1732 ntBASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Gm13506-201ENSMUST00000120391 1083 ntBASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Upf3bQ3ULL6 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 119.6 ms