Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col17a1Q07563 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col17a1Q07563 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col17a1Q07563 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col17a1Q07563 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col17a1Q07563 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC8.38□□□□□ -1.07
Col17a1Q07563 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Col17a1Q07563 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col17a1Q07563 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col17a1Q07563 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col17a1Q07563 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col17a1Q07563 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC8.38□□□□□ -1.07
Col17a1Q07563 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col17a1Q07563 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Col17a1Q07563 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col17a1Q07563 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Col17a1Q07563 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col17a1Q07563 Gm23178-201ENSMUST00000116782 95 ntBASIC8.38□□□□□ -1.07
Col17a1Q07563 Gm14610-201ENSMUST00000118358 966 ntBASIC8.38□□□□□ -1.07
Col17a1Q07563 Gm11822-201ENSMUST00000119177 415 ntBASIC8.38□□□□□ -1.07
Col17a1Q07563 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC8.38□□□□□ -1.07
Col17a1Q07563 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC8.38□□□□□ -1.07
Col17a1Q07563 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Col17a1Q07563 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Col17a1Q07563 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Col17a1Q07563 Gm23465-201ENSMUST00000157134 262 ntBASIC8.38□□□□□ -1.07
Col17a1Q07563 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Col17a1Q07563 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Col17a1Q07563 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Col17a1Q07563 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col17a1Q07563 Gm32453-201ENSMUST00000204183 456 ntBASIC8.38□□□□□ -1.07
Col17a1Q07563 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC8.38□□□□□ -1.07
Col17a1Q07563 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC8.38□□□□□ -1.07
Col17a1Q07563 Gm9685-201ENSMUST00000211275 538 ntBASIC8.38□□□□□ -1.07
Col17a1Q07563 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC8.38□□□□□ -1.07
Col17a1Q07563 AC190403.1-201ENSMUST00000224515 1325 ntBASIC8.38□□□□□ -1.07
Col17a1Q07563 AC154424.1-201ENSMUST00000225883 799 ntBASIC8.38□□□□□ -1.07
Col17a1Q07563 AC107742.1-201ENSMUST00000227769 1390 ntBASIC8.38□□□□□ -1.07
Col17a1Q07563 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col17a1Q07563 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col17a1Q07563 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col17a1Q07563 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col17a1Q07563 CT025535.2-201ENSMUST00000228572 7441 ntBASIC8.37□□□□□ -1.07
Col17a1Q07563 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col17a1Q07563 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Col17a1Q07563 Gm33378-201ENSMUST00000219831 2758 ntBASIC8.37□□□□□ -1.07
Col17a1Q07563 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col17a1Q07563 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col17a1Q07563 AC123705.3-201ENSMUST00000223531 2069 ntBASIC8.37□□□□□ -1.07
Col17a1Q07563 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col17a1Q07563 Gm42613-201ENSMUST00000199975 1931 ntBASIC8.37□□□□□ -1.07
Col17a1Q07563 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Col17a1Q07563 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC8.37□□□□□ -1.07
Col17a1Q07563 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Col17a1Q07563 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col17a1Q07563 Gm29084-201ENSMUST00000185587 1452 ntBASIC8.37□□□□□ -1.07
Col17a1Q07563 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Col17a1Q07563 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col17a1Q07563 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC8.37□□□□□ -1.07
Col17a1Q07563 Gm6382-201ENSMUST00000118873 942 ntBASIC8.37□□□□□ -1.07
Col17a1Q07563 Klra14-ps-201ENSMUST00000119532 802 ntBASIC8.37□□□□□ -1.07
Col17a1Q07563 Gm6031-201ENSMUST00000121314 1054 ntBASIC8.37□□□□□ -1.07
Col17a1Q07563 Gm12422-201ENSMUST00000121431 302 ntBASIC8.37□□□□□ -1.07
Col17a1Q07563 Gm25295-201ENSMUST00000122794 306 ntBASIC8.37□□□□□ -1.07
Col17a1Q07563 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col17a1Q07563 Gm17063-201ENSMUST00000168135 456 ntBASIC8.37□□□□□ -1.07
Col17a1Q07563 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC8.37□□□□□ -1.07
Col17a1Q07563 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC8.37□□□□□ -1.07
Col17a1Q07563 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Col17a1Q07563 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC8.37□□□□□ -1.07
Col17a1Q07563 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Col17a1Q07563 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC8.37□□□□□ -1.07
Col17a1Q07563 AC164597.2-201ENSMUST00000226738 603 ntBASIC8.37□□□□□ -1.07
Col17a1Q07563 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Col17a1Q07563 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col17a1Q07563 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Col17a1Q07563 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Col17a1Q07563 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col17a1Q07563 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Col17a1Q07563 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Col17a1Q07563 Ubr5-204ENSMUST00000226414 8397 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Col17a1Q07563 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC8.36□□□□□ -1.07
Col17a1Q07563 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC8.36□□□□□ -1.07
Col17a1Q07563 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC8.36□□□□□ -1.07
Col17a1Q07563 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col17a1Q07563 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Col17a1Q07563 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col17a1Q07563 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Col17a1Q07563 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Col17a1Q07563 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Col17a1Q07563 Gm14046-201ENSMUST00000119389 509 ntBASIC8.36□□□□□ -1.07
Col17a1Q07563 Gm23883-201ENSMUST00000122686 290 ntBASIC8.36□□□□□ -1.07
Col17a1Q07563 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Col17a1Q07563 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Col17a1Q07563 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Col17a1Q07563 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col17a1Q07563 Gm37632-201ENSMUST00000191811 1142 ntBASIC8.36□□□□□ -1.07
Col17a1Q07563 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Col17a1Q07563 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Col17a1Q07563 Gm18016-201ENSMUST00000216119 801 ntBASIC8.36□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 98.1 ms