Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gm13641-201ENSMUST00000117993 473 ntBASIC5□□□□□ -1.61
Scn1bP97952 Gm11624-201ENSMUST00000118579 1041 ntBASIC5□□□□□ -1.61
Scn1bP97952 Gm13162-201ENSMUST00000121481 454 ntBASIC5□□□□□ -1.61
Scn1bP97952 Gm13669-201ENSMUST00000122366 457 ntBASIC5□□□□□ -1.61
Scn1bP97952 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC5□□□□□ -1.61
Scn1bP97952 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5□□□□□ -1.61
Scn1bP97952 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC5□□□□□ -1.61
Scn1bP97952 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC5□□□□□ -1.61
Scn1bP97952 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC5□□□□□ -1.61
Scn1bP97952 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC5□□□□□ -1.61
Scn1bP97952 Gm19206-201ENSMUST00000186401 827 ntBASIC5□□□□□ -1.61
Scn1bP97952 Mir6516-201ENSMUST00000196236 110 ntBASIC5□□□□□ -1.61
Scn1bP97952 Gm20239-201ENSMUST00000196610 982 ntBASIC5□□□□□ -1.61
Scn1bP97952 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Scn1bP97952 Gm31306-201ENSMUST00000197517 508 ntBASIC5□□□□□ -1.61
Scn1bP97952 Gm44382-201ENSMUST00000198683 122 ntBASIC5□□□□□ -1.61
Scn1bP97952 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC5□□□□□ -1.61
Scn1bP97952 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC5□□□□□ -1.61
Scn1bP97952 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC5□□□□□ -1.61
Scn1bP97952 Gm45485-201ENSMUST00000211229 357 ntBASIC5□□□□□ -1.61
Scn1bP97952 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC5□□□□□ -1.61
Scn1bP97952 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC5□□□□□ -1.61
Scn1bP97952 Gm5831-201ENSMUST00000216016 1209 ntBASIC5□□□□□ -1.61
Scn1bP97952 Gm18387-201ENSMUST00000220333 702 ntBASIC5□□□□□ -1.61
Scn1bP97952 AC079644.1-201ENSMUST00000220586 405 ntBASIC5□□□□□ -1.61
Scn1bP97952 Gm46996-201ENSMUST00000220924 408 ntBASIC5□□□□□ -1.61
Scn1bP97952 AC154618.2-201ENSMUST00000228299 452 ntBASIC5□□□□□ -1.61
Scn1bP97952 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC5□□□□□ -1.61
Scn1bP97952 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC5□□□□□ -1.61
Scn1bP97952 Gm25818-201ENSMUST00000083282 164 ntBASIC5□□□□□ -1.61
Scn1bP97952 Gm22351-201ENSMUST00000083925 107 ntBASIC5□□□□□ -1.61
Scn1bP97952 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Scn1bP97952 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5□□□□□ -1.61
Scn1bP97952 Gm37356-201ENSMUST00000193362 1613 ntBASIC5□□□□□ -1.61
Scn1bP97952 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Scn1bP97952 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Scn1bP97952 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Scn1bP97952 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5□□□□□ -1.61
Scn1bP97952 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC5□□□□□ -1.61
Scn1bP97952 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Scn1bP97952 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC5□□□□□ -1.61
Scn1bP97952 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC5□□□□□ -1.61
Scn1bP97952 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
Scn1bP97952 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Scn1bP97952 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Scn1bP97952 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Scn1bP97952 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Scn1bP97952 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Scn1bP97952 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Scn1bP97952 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Scn1bP97952 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Scn1bP97952 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Scn1bP97952 Gm14985-201ENSMUST00000118693 786 ntBASIC4.99□□□□□ -1.61
Scn1bP97952 Gm11313-201ENSMUST00000118779 432 ntBASIC4.99□□□□□ -1.61
Scn1bP97952 Gm12849-201ENSMUST00000120013 739 ntBASIC4.99□□□□□ -1.61
Scn1bP97952 Gm11609-201ENSMUST00000121926 793 ntBASIC4.99□□□□□ -1.61
Scn1bP97952 Gm25290-201ENSMUST00000122796 144 ntBASIC4.99□□□□□ -1.61
Scn1bP97952 Gm22428-201ENSMUST00000158554 132 ntBASIC4.99□□□□□ -1.61
Scn1bP97952 Gm23179-201ENSMUST00000158693 304 ntBASIC4.99□□□□□ -1.61
Scn1bP97952 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Scn1bP97952 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC4.99□□□□□ -1.61
Scn1bP97952 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC4.99□□□□□ -1.61
Scn1bP97952 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC4.99□□□□□ -1.61
Scn1bP97952 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Scn1bP97952 Mir7212-201ENSMUST00000184098 61 ntBASIC4.99□□□□□ -1.61
Scn1bP97952 Gm27348-201ENSMUST00000184511 170 ntBASIC4.99□□□□□ -1.61
Scn1bP97952 Scgb2b33-201ENSMUST00000187413 334 ntBASIC4.99□□□□□ -1.61
Scn1bP97952 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Scn1bP97952 Gm21803-201ENSMUST00000188897 693 ntBASIC4.99□□□□□ -1.61
Scn1bP97952 Gm28567-201ENSMUST00000190270 693 ntBASIC4.99□□□□□ -1.61
Scn1bP97952 Gm18426-201ENSMUST00000191874 973 ntBASIC4.99□□□□□ -1.61
Scn1bP97952 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Scn1bP97952 Gm37044-201ENSMUST00000193531 693 ntBASIC4.99□□□□□ -1.61
Scn1bP97952 Gm37336-202ENSMUST00000193705 468 ntBASIC4.99□□□□□ -1.61
Scn1bP97952 Gm38369-201ENSMUST00000195101 693 ntBASIC4.99□□□□□ -1.61
Scn1bP97952 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Scn1bP97952 Gm17937-201ENSMUST00000197908 742 ntBASIC4.99□□□□□ -1.61
Scn1bP97952 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC4.99□□□□□ -1.61
Scn1bP97952 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC4.99□□□□□ -1.61
Scn1bP97952 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC4.99□□□□□ -1.61
Scn1bP97952 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Scn1bP97952 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC4.99□□□□□ -1.61
Scn1bP97952 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC4.99□□□□□ -1.61
Scn1bP97952 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC4.99□□□□□ -1.61
Scn1bP97952 Gm4510-201ENSMUST00000218265 427 ntBASIC4.99□□□□□ -1.61
Scn1bP97952 Gm4263-201ENSMUST00000220693 1101 ntBASIC4.99□□□□□ -1.61
Scn1bP97952 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Scn1bP97952 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC4.99□□□□□ -1.61
Scn1bP97952 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Scn1bP97952 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Scn1bP97952 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Scn1bP97952 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Scn1bP97952 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Scn1bP97952 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Scn1bP97952 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Scn1bP97952 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC4.99□□□□□ -1.61
Scn1bP97952 AC131068.3-201ENSMUST00000228438 1456 ntBASIC4.99□□□□□ -1.61
Scn1bP97952 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Scn1bP97952 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Scn1bP97952 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms