Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm26046-201ENSMUST00000157312 166 ntBASIC4.51□□□□□ -1.69
Nkx2-1P50220 Gm23855-201ENSMUST00000158377 135 ntBASIC4.51□□□□□ -1.69
Nkx2-1P50220 Gm17366-201ENSMUST00000167629 187 ntBASIC4.51□□□□□ -1.69
Nkx2-1P50220 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Nkx2-1P50220 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC4.51□□□□□ -1.69
Nkx2-1P50220 Gm18728-201ENSMUST00000186155 753 ntBASIC4.51□□□□□ -1.69
Nkx2-1P50220 Gm19280-201ENSMUST00000190191 205 ntBASIC4.51□□□□□ -1.69
Nkx2-1P50220 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC4.51□□□□□ -1.69
Nkx2-1P50220 Gm37177-201ENSMUST00000193768 417 ntBASIC4.51□□□□□ -1.69
Nkx2-1P50220 Gm43316-201ENSMUST00000197252 1295 ntBASIC4.51□□□□□ -1.69
Nkx2-1P50220 Gm44403-201ENSMUST00000198554 129 ntBASIC4.51□□□□□ -1.69
Nkx2-1P50220 Gm18851-201ENSMUST00000210087 1058 ntBASIC4.51□□□□□ -1.69
Nkx2-1P50220 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC4.51□□□□□ -1.69
Nkx2-1P50220 AC126685.1-201ENSMUST00000221001 121 ntBASIC4.51□□□□□ -1.69
Nkx2-1P50220 AC164424.1-201ENSMUST00000221690 170 ntBASIC4.51□□□□□ -1.69
Nkx2-1P50220 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Nkx2-1P50220 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Nkx2-1P50220 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
Nkx2-1P50220 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Nkx2-1P50220 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Nkx2-1P50220 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Nkx2-1P50220 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Nkx2-1P50220 n-R5s69-201ENSMUST00000083872 119 ntBASIC4.51□□□□□ -1.69
Nkx2-1P50220 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
Nkx2-1P50220 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Nkx2-1P50220 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Nkx2-1P50220 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Nkx2-1P50220 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
Nkx2-1P50220 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
Nkx2-1P50220 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Nkx2-1P50220 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC4.51□□□□□ -1.69
Nkx2-1P50220 Gm38224-201ENSMUST00000191648 2100 ntBASIC4.51□□□□□ -1.69
Nkx2-1P50220 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Nkx2-1P50220 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Nkx2-1P50220 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Nkx2-1P50220 AC144772.1-201ENSMUST00000226372 2398 ntBASIC4.5□□□□□ -1.69
Nkx2-1P50220 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Nkx2-1P50220 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Nkx2-1P50220 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Nkx2-1P50220 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Nkx2-1P50220 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC4.5□□□□□ -1.69
Nkx2-1P50220 Gm23440-201ENSMUST00000104299 130 ntBASIC4.5□□□□□ -1.69
Nkx2-1P50220 Gm12465-201ENSMUST00000118591 300 ntBASIC4.5□□□□□ -1.69
Nkx2-1P50220 Gm14783-201ENSMUST00000118900 663 ntBASIC4.5□□□□□ -1.69
Nkx2-1P50220 Gm7658-201ENSMUST00000119064 1124 ntBASIC4.5□□□□□ -1.69
Nkx2-1P50220 Gm7079-201ENSMUST00000119726 171 ntBASIC4.5□□□□□ -1.69
Nkx2-1P50220 Gm14229-201ENSMUST00000121178 850 ntBASIC4.5□□□□□ -1.69
Nkx2-1P50220 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Nkx2-1P50220 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Nkx2-1P50220 Gm24733-201ENSMUST00000158863 253 ntBASIC4.5□□□□□ -1.69
Nkx2-1P50220 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC4.5□□□□□ -1.69
Nkx2-1P50220 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Nkx2-1P50220 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Nkx2-1P50220 Gm25065-201ENSMUST00000177914 132 ntBASIC4.5□□□□□ -1.69
Nkx2-1P50220 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Nkx2-1P50220 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Nkx2-1P50220 Gm25891-201ENSMUST00000180050 132 ntBASIC4.5□□□□□ -1.69
Nkx2-1P50220 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Nkx2-1P50220 Gm7952-201ENSMUST00000180540 984 ntBASIC4.5□□□□□ -1.69
Nkx2-1P50220 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Nkx2-1P50220 Gm28934-201ENSMUST00000186491 346 ntBASIC4.5□□□□□ -1.69
Nkx2-1P50220 Gm29474-201ENSMUST00000187688 379 ntBASIC4.5□□□□□ -1.69
Nkx2-1P50220 Gm18177-201ENSMUST00000188373 404 ntBASIC4.5□□□□□ -1.69
Nkx2-1P50220 Gm37684-201ENSMUST00000192779 355 ntBASIC4.5□□□□□ -1.69
Nkx2-1P50220 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Nkx2-1P50220 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Nkx2-1P50220 Gm42961-201ENSMUST00000202023 181 ntBASIC4.5□□□□□ -1.69
Nkx2-1P50220 Gm18482-201ENSMUST00000202405 760 ntBASIC4.5□□□□□ -1.69
Nkx2-1P50220 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Nkx2-1P50220 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC4.5□□□□□ -1.69
Nkx2-1P50220 Gm18467-201ENSMUST00000208805 434 ntBASIC4.5□□□□□ -1.69
Nkx2-1P50220 Gm45269-201ENSMUST00000210359 282 ntBASIC4.5□□□□□ -1.69
Nkx2-1P50220 Gm8748-201ENSMUST00000211125 587 ntBASIC4.5□□□□□ -1.69
Nkx2-1P50220 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC4.5□□□□□ -1.69
Nkx2-1P50220 Gm20786-201ENSMUST00000212649 436 ntBASIC4.5□□□□□ -1.69
Nkx2-1P50220 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC4.5□□□□□ -1.69
Nkx2-1P50220 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC4.5□□□□□ -1.69
Nkx2-1P50220 Gm36262-201ENSMUST00000223274 499 ntBASIC4.5□□□□□ -1.69
Nkx2-1P50220 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Nkx2-1P50220 AC154642.1-201ENSMUST00000224173 740 ntBASIC4.5□□□□□ -1.69
Nkx2-1P50220 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Nkx2-1P50220 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Nkx2-1P50220 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Nkx2-1P50220 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Nkx2-1P50220 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Nkx2-1P50220 Gm25810-201ENSMUST00000082752 108 ntBASIC4.5□□□□□ -1.69
Nkx2-1P50220 Snord59a-201ENSMUST00000082844 74 ntBASIC4.5□□□□□ -1.69
Nkx2-1P50220 Gm25005-201ENSMUST00000083812 156 ntBASIC4.5□□□□□ -1.69
Nkx2-1P50220 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Nkx2-1P50220 AC122317.3-201ENSMUST00000219320 3524 ntBASIC4.5□□□□□ -1.69
Nkx2-1P50220 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Nkx2-1P50220 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Nkx2-1P50220 Gm45415-201ENSMUST00000209644 2074 ntBASIC4.5□□□□□ -1.69
Nkx2-1P50220 Gm19210-201ENSMUST00000199562 1350 ntBASIC4.5□□□□□ -1.69
Nkx2-1P50220 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Nkx2-1P50220 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
Nkx2-1P50220 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Nkx2-1P50220 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Nkx2-1P50220 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Nkx2-1P50220 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms