Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm24944-201ENSMUST00000158330 128 ntBASIC4.27□□□□□ -1.73
Sdc1P18828 Gm25904-201ENSMUST00000158491 143 ntBASIC4.27□□□□□ -1.73
Sdc1P18828 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC4.27□□□□□ -1.73
Sdc1P18828 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Sdc1P18828 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Sdc1P18828 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC4.27□□□□□ -1.73
Sdc1P18828 Mir683-1-201ENSMUST00000179371 109 ntBASIC4.27□□□□□ -1.73
Sdc1P18828 Gm18828-202ENSMUST00000181035 310 ntBASIC4.27□□□□□ -1.73
Sdc1P18828 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC4.27□□□□□ -1.73
Sdc1P18828 Mir6769b-201ENSMUST00000184793 60 ntBASIC4.27□□□□□ -1.73
Sdc1P18828 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC4.27□□□□□ -1.73
Sdc1P18828 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Sdc1P18828 Gm37135-201ENSMUST00000192652 534 ntBASIC4.27□□□□□ -1.73
Sdc1P18828 Gm37710-201ENSMUST00000193501 1274 ntBASIC4.27□□□□□ -1.73
Sdc1P18828 Gm2147-201ENSMUST00000193588 639 ntBASIC4.27□□□□□ -1.73
Sdc1P18828 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC4.27□□□□□ -1.73
Sdc1P18828 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Sdc1P18828 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC4.27□□□□□ -1.73
Sdc1P18828 Gm43928-201ENSMUST00000203737 409 ntBASIC4.27□□□□□ -1.73
Sdc1P18828 Gm20136-201ENSMUST00000207501 891 ntBASIC4.27□□□□□ -1.73
Sdc1P18828 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC4.27□□□□□ -1.73
Sdc1P18828 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC4.27□□□□□ -1.73
Sdc1P18828 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC4.27□□□□□ -1.73
Sdc1P18828 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC4.27□□□□□ -1.73
Sdc1P18828 Gm45908-201ENSMUST00000212977 1177 ntBASIC4.27□□□□□ -1.73
Sdc1P18828 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC4.27□□□□□ -1.73
Sdc1P18828 AC134439.1-201ENSMUST00000220923 600 ntBASIC4.27□□□□□ -1.73
Sdc1P18828 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC4.27□□□□□ -1.73
Sdc1P18828 AC131033.1-201ENSMUST00000228223 279 ntBASIC4.27□□□□□ -1.73
Sdc1P18828 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Sdc1P18828 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Sdc1P18828 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Sdc1P18828 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Sdc1P18828 Mir138-1-201ENSMUST00000083480 99 ntBASIC4.27□□□□□ -1.73
Sdc1P18828 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Sdc1P18828 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Sdc1P18828 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Sdc1P18828 Gm43612-201ENSMUST00000196087 3207 ntBASIC4.27□□□□□ -1.73
Sdc1P18828 Gm44424-201ENSMUST00000203438 1826 ntBASIC4.27□□□□□ -1.73
Sdc1P18828 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Sdc1P18828 Gm42645-201ENSMUST00000201573 1627 ntBASIC4.27□□□□□ -1.73
Sdc1P18828 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Sdc1P18828 AC153532.3-201ENSMUST00000218660 3848 ntBASIC4.27□□□□□ -1.73
Sdc1P18828 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
Sdc1P18828 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Sdc1P18828 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Sdc1P18828 Gm38277-201ENSMUST00000195172 1367 ntBASIC4.27□□□□□ -1.73
Sdc1P18828 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.26□□□□□ -1.73
Sdc1P18828 AC122317.3-201ENSMUST00000219320 3524 ntBASIC4.26□□□□□ -1.73
Sdc1P18828 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Sdc1P18828 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Sdc1P18828 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Sdc1P18828 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Sdc1P18828 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Sdc1P18828 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Sdc1P18828 Gm2099-202ENSMUST00000223310 3341 ntBASIC4.26□□□□□ -1.73
Sdc1P18828 Gm23527-201ENSMUST00000104570 130 ntBASIC4.26□□□□□ -1.73
Sdc1P18828 Gm14086-201ENSMUST00000117152 173 ntBASIC4.26□□□□□ -1.73
Sdc1P18828 Gm16418-201ENSMUST00000118577 171 ntBASIC4.26□□□□□ -1.73
Sdc1P18828 Gm12262-201ENSMUST00000119915 305 ntBASIC4.26□□□□□ -1.73
Sdc1P18828 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC4.26□□□□□ -1.73
Sdc1P18828 Gm12494-201ENSMUST00000121684 521 ntBASIC4.26□□□□□ -1.73
Sdc1P18828 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC4.26□□□□□ -1.73
Sdc1P18828 Gm22084-201ENSMUST00000157585 105 ntBASIC4.26□□□□□ -1.73
Sdc1P18828 Gm25907-201ENSMUST00000158486 125 ntBASIC4.26□□□□□ -1.73
Sdc1P18828 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC4.26□□□□□ -1.73
Sdc1P18828 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC4.26□□□□□ -1.73
Sdc1P18828 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Sdc1P18828 Gm9320-201ENSMUST00000184151 473 ntBASIC4.26□□□□□ -1.73
Sdc1P18828 Gm29484-201ENSMUST00000186067 324 ntBASIC4.26□□□□□ -1.73
Sdc1P18828 Gm36999-201ENSMUST00000192756 1046 ntBASIC4.26□□□□□ -1.73
Sdc1P18828 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.26□□□□□ -1.73
Sdc1P18828 Gm36998-201ENSMUST00000193205 704 ntBASIC4.26□□□□□ -1.73
Sdc1P18828 Gm37526-201ENSMUST00000194640 619 ntBASIC4.26□□□□□ -1.73
Sdc1P18828 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC4.26□□□□□ -1.73
Sdc1P18828 Gm2622-201ENSMUST00000200018 471 ntBASIC4.26□□□□□ -1.73
Sdc1P18828 Gm44074-201ENSMUST00000204562 337 ntBASIC4.26□□□□□ -1.73
Sdc1P18828 Gm44845-201ENSMUST00000208773 335 ntBASIC4.26□□□□□ -1.73
Sdc1P18828 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Sdc1P18828 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC4.26□□□□□ -1.73
Sdc1P18828 AC124445.1-201ENSMUST00000218613 452 ntBASIC4.26□□□□□ -1.73
Sdc1P18828 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC4.26□□□□□ -1.73
Sdc1P18828 Gm18413-201ENSMUST00000221573 655 ntBASIC4.26□□□□□ -1.73
Sdc1P18828 Nsa2-203ENSMUST00000225410 974 ntBASIC4.26□□□□□ -1.73
Sdc1P18828 AC154838.2-201ENSMUST00000226602 747 ntBASIC4.26□□□□□ -1.73
Sdc1P18828 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC4.26□□□□□ -1.73
Sdc1P18828 Gm5612-201ENSMUST00000053326 375 ntBASIC4.26□□□□□ -1.73
Sdc1P18828 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Sdc1P18828 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Sdc1P18828 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Sdc1P18828 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Sdc1P18828 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Sdc1P18828 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.26□□□□□ -1.73
Sdc1P18828 Gm38243-201ENSMUST00000194737 1567 ntBASIC4.26□□□□□ -1.73
Sdc1P18828 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Sdc1P18828 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Sdc1P18828 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Sdc1P18828 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.26□□□□□ -1.73
Sdc1P18828 Gm19176-201ENSMUST00000222149 1831 ntBASIC4.25□□□□□ -1.73
Sdc1P18828 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms