Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 AC154616.2-201ENSMUST00000227978 398 ntBASIC4.47□□□□□ -1.69
Cdx1P18111 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cdx1P18111 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Cdx1P18111 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cdx1P18111 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC4.47□□□□□ -1.69
Cdx1P18111 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Cdx1P18111 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
Cdx1P18111 Gm15011-201ENSMUST00000117724 1480 ntBASIC4.47□□□□□ -1.69
Cdx1P18111 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC4.47□□□□□ -1.69
Cdx1P18111 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Cdx1P18111 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cdx1P18111 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cdx1P18111 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cdx1P18111 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Cdx1P18111 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
Cdx1P18111 AC122357.1-201ENSMUST00000221652 1515 ntBASIC4.46□□□□□ -1.69
Cdx1P18111 Gm12633-201ENSMUST00000117742 1705 ntBASIC4.46□□□□□ -1.69
Cdx1P18111 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
Cdx1P18111 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC4.46□□□□□ -1.69
Cdx1P18111 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.46□□□□□ -1.69
Cdx1P18111 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cdx1P18111 AC130827.1-201ENSMUST00000220476 3850 ntBASIC4.46□□□□□ -1.7
Cdx1P18111 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC4.46□□□□□ -1.7
Cdx1P18111 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Cdx1P18111 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Cdx1P18111 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cdx1P18111 Gm7709-201ENSMUST00000199391 1858 ntBASIC4.46□□□□□ -1.7
Cdx1P18111 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Cdx1P18111 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Cdx1P18111 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Cdx1P18111 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cdx1P18111 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC4.46□□□□□ -1.7
Cdx1P18111 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC4.46□□□□□ -1.7
Cdx1P18111 Gm11313-201ENSMUST00000118779 432 ntBASIC4.46□□□□□ -1.7
Cdx1P18111 Gm8061-201ENSMUST00000122380 350 ntBASIC4.46□□□□□ -1.7
Cdx1P18111 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Cdx1P18111 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Cdx1P18111 Gm22158-201ENSMUST00000158411 126 ntBASIC4.46□□□□□ -1.7
Cdx1P18111 Gm16269-201ENSMUST00000160532 409 ntBASIC4.46□□□□□ -1.7
Cdx1P18111 Gm9597-201ENSMUST00000171913 602 ntBASIC4.46□□□□□ -1.7
Cdx1P18111 Gm22932-201ENSMUST00000175510 72 ntBASIC4.46□□□□□ -1.7
Cdx1P18111 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
Cdx1P18111 Gm29281-201ENSMUST00000188077 381 ntBASIC4.46□□□□□ -1.7
Cdx1P18111 Gm6119-201ENSMUST00000193443 1206 ntBASIC4.46□□□□□ -1.7
Cdx1P18111 Gm42619-201ENSMUST00000197564 1136 ntBASIC4.46□□□□□ -1.7
Cdx1P18111 Gm8929-201ENSMUST00000197781 1132 ntBASIC4.46□□□□□ -1.7
Cdx1P18111 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC4.46□□□□□ -1.7
Cdx1P18111 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC4.46□□□□□ -1.7
Cdx1P18111 Gm45200-201ENSMUST00000207434 919 ntBASIC4.46□□□□□ -1.7
Cdx1P18111 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC4.46□□□□□ -1.7
Cdx1P18111 Gm7802-201ENSMUST00000216464 262 ntBASIC4.46□□□□□ -1.7
Cdx1P18111 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Cdx1P18111 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC4.46□□□□□ -1.7
Cdx1P18111 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Cdx1P18111 CT030242.3-201ENSMUST00000221231 581 ntBASIC4.46□□□□□ -1.7
Cdx1P18111 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC4.46□□□□□ -1.7
Cdx1P18111 Gm36262-201ENSMUST00000223274 499 ntBASIC4.46□□□□□ -1.7
Cdx1P18111 AC141884.1-201ENSMUST00000226327 636 ntBASIC4.46□□□□□ -1.7
Cdx1P18111 AC154618.1-201ENSMUST00000227451 303 ntBASIC4.46□□□□□ -1.7
Cdx1P18111 AC131178.1-201ENSMUST00000228649 492 ntBASIC4.46□□□□□ -1.7
Cdx1P18111 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cdx1P18111 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC4.46□□□□□ -1.7
Cdx1P18111 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Cdx1P18111 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Cdx1P18111 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Cdx1P18111 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Cdx1P18111 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cdx1P18111 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
Cdx1P18111 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Cdx1P18111 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Cdx1P18111 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Cdx1P18111 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cdx1P18111 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Cdx1P18111 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC4.46□□□□□ -1.7
Cdx1P18111 Gm42860-201ENSMUST00000196492 3991 ntBASIC4.46□□□□□ -1.7
Cdx1P18111 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Cdx1P18111 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Cdx1P18111 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Cdx1P18111 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cdx1P18111 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cdx1P18111 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC4.45□□□□□ -1.7
Cdx1P18111 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC4.45□□□□□ -1.7
Cdx1P18111 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cdx1P18111 Gm37357-201ENSMUST00000192386 3123 ntBASIC4.45□□□□□ -1.7
Cdx1P18111 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Cdx1P18111 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cdx1P18111 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
Cdx1P18111 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cdx1P18111 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Cdx1P18111 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Cdx1P18111 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Cdx1P18111 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cdx1P18111 Gm13818-201ENSMUST00000119441 511 ntBASIC4.45□□□□□ -1.7
Cdx1P18111 Defa-ps11-201ENSMUST00000119719 299 ntBASIC4.45□□□□□ -1.7
Cdx1P18111 Gm15034-201ENSMUST00000120043 349 ntBASIC4.45□□□□□ -1.7
Cdx1P18111 Gm16423-201ENSMUST00000120078 947 ntBASIC4.45□□□□□ -1.7
Cdx1P18111 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC4.45□□□□□ -1.7
Cdx1P18111 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC4.45□□□□□ -1.7
Cdx1P18111 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC4.45□□□□□ -1.7
Cdx1P18111 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms