Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Col1a1P11087 Gm44242-201ENSMUST00000204212 2721 ntBASIC6.14□□□□□ -1.43
Col1a1P11087 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Col1a1P11087 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Col1a1P11087 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col1a1P11087 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Col1a1P11087 CT030159.1-201ENSMUST00000221580 2261 ntBASIC6.14□□□□□ -1.43
Col1a1P11087 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Col1a1P11087 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Col1a1P11087 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Col1a1P11087 Gm11822-201ENSMUST00000119177 415 ntBASIC6.14□□□□□ -1.43
Col1a1P11087 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC6.14□□□□□ -1.43
Col1a1P11087 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC6.14□□□□□ -1.43
Col1a1P11087 Gm25665-201ENSMUST00000157695 110 ntBASIC6.14□□□□□ -1.43
Col1a1P11087 Gm16589-201ENSMUST00000159522 918 ntBASIC6.14□□□□□ -1.43
Col1a1P11087 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Col1a1P11087 Gm38046-201ENSMUST00000192733 550 ntBASIC6.14□□□□□ -1.43
Col1a1P11087 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC6.14□□□□□ -1.43
Col1a1P11087 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC6.14□□□□□ -1.43
Col1a1P11087 Gm37670-201ENSMUST00000193622 229 ntBASIC6.14□□□□□ -1.43
Col1a1P11087 Trbv9-201ENSMUST00000194494 290 ntBASIC6.14□□□□□ -1.43
Col1a1P11087 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col1a1P11087 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC6.14□□□□□ -1.43
Col1a1P11087 CT030705.1-201ENSMUST00000223971 533 ntBASIC6.14□□□□□ -1.43
Col1a1P11087 AC154627.3-201ENSMUST00000228441 334 ntBASIC6.14□□□□□ -1.43
Col1a1P11087 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col1a1P11087 Gm37400-201ENSMUST00000193148 3605 ntBASIC6.14□□□□□ -1.43
Col1a1P11087 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col1a1P11087 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC6.13□□□□□ -1.43
Col1a1P11087 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC6.13□□□□□ -1.43
Col1a1P11087 Gm42998-201ENSMUST00000197053 2371 ntBASIC6.13□□□□□ -1.43
Col1a1P11087 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col1a1P11087 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC6.13□□□□□ -1.43
Col1a1P11087 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
Col1a1P11087 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
Col1a1P11087 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC6.13□□□□□ -1.43
Col1a1P11087 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC6.13□□□□□ -1.43
Col1a1P11087 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Col1a1P11087 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col1a1P11087 Gm13762-202ENSMUST00000168169 2180 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Col1a1P11087 Gm18163-201ENSMUST00000197877 1643 ntBASIC6.13□□□□□ -1.43
Col1a1P11087 Gm23608-201ENSMUST00000104545 128 ntBASIC6.13□□□□□ -1.43
Col1a1P11087 Gm7840-201ENSMUST00000122086 533 ntBASIC6.13□□□□□ -1.43
Col1a1P11087 Gm25103-201ENSMUST00000122671 318 ntBASIC6.13□□□□□ -1.43
Col1a1P11087 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Col1a1P11087 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col1a1P11087 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col1a1P11087 Gm26034-201ENSMUST00000158154 116 ntBASIC6.13□□□□□ -1.43
Col1a1P11087 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC6.13□□□□□ -1.43
Col1a1P11087 Gm37884-201ENSMUST00000191857 818 ntBASIC6.13□□□□□ -1.43
Col1a1P11087 Gm37444-201ENSMUST00000193605 439 ntBASIC6.13□□□□□ -1.43
Col1a1P11087 Gm29781-201ENSMUST00000203862 478 ntBASIC6.13□□□□□ -1.43
Col1a1P11087 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC6.13□□□□□ -1.43
Col1a1P11087 AC125399.1-201ENSMUST00000224236 595 ntBASIC6.13□□□□□ -1.43
Col1a1P11087 CT956049.1-201ENSMUST00000225671 763 ntBASIC6.13□□□□□ -1.43
Col1a1P11087 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Col1a1P11087 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Col1a1P11087 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Col1a1P11087 Gm43395-201ENSMUST00000198717 2240 ntBASIC6.13□□□□□ -1.43
Col1a1P11087 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Col1a1P11087 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col1a1P11087 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col1a1P11087 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC6.12□□□□□ -1.43
Col1a1P11087 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col1a1P11087 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Col1a1P11087 Gm44695-201ENSMUST00000205567 1631 ntBASIC6.12□□□□□ -1.43
Col1a1P11087 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col1a1P11087 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Col1a1P11087 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col1a1P11087 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Col1a1P11087 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Col1a1P11087 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col1a1P11087 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col1a1P11087 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Col1a1P11087 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col1a1P11087 Gm12237-201ENSMUST00000120158 470 ntBASIC6.12□□□□□ -1.43
Col1a1P11087 Gm15388-201ENSMUST00000121578 726 ntBASIC6.12□□□□□ -1.43
Col1a1P11087 Gm6047-201ENSMUST00000167221 574 ntBASIC6.12□□□□□ -1.43
Col1a1P11087 Gm8614-201ENSMUST00000182528 978 ntBASIC6.12□□□□□ -1.43
Col1a1P11087 Gm23925-202ENSMUST00000188429 132 ntBASIC6.12□□□□□ -1.43
Col1a1P11087 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC6.12□□□□□ -1.43
Col1a1P11087 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC6.12□□□□□ -1.43
Col1a1P11087 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col1a1P11087 Gm46327-201ENSMUST00000218240 365 ntBASIC6.12□□□□□ -1.43
Col1a1P11087 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col1a1P11087 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Col1a1P11087 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Col1a1P11087 n-R5s85-201ENSMUST00000083453 113 ntBASIC6.12□□□□□ -1.43
Col1a1P11087 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Col1a1P11087 Gm29084-201ENSMUST00000185587 1452 ntBASIC6.12□□□□□ -1.43
Col1a1P11087 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC6.12□□□□□ -1.43
Col1a1P11087 Gm42781-201ENSMUST00000201317 2719 ntBASIC6.12□□□□□ -1.43
Col1a1P11087 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col1a1P11087 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC6.12□□□□□ -1.43
Col1a1P11087 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col1a1P11087 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col1a1P11087 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC6.12□□□□□ -1.43
Col1a1P11087 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col1a1P11087 Gm44843-201ENSMUST00000208320 1396 ntBASIC6.12□□□□□ -1.43
Col1a1P11087 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms