Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
Herc1E9PZP8 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
Herc1E9PZP8 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Gm25833-201ENSMUST00000104137 133 ntBASIC2.9□□□□□ -1.95
Herc1E9PZP8 Gm12423-201ENSMUST00000118334 135 ntBASIC2.9□□□□□ -1.95
Herc1E9PZP8 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC2.9□□□□□ -1.95
Herc1E9PZP8 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
Herc1E9PZP8 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Gm4045-201ENSMUST00000204076 310 ntBASIC2.9□□□□□ -1.95
Herc1E9PZP8 Gm5338-201ENSMUST00000209530 639 ntBASIC2.9□□□□□ -1.95
Herc1E9PZP8 Gm8189-203ENSMUST00000211159 1225 ntBASIC2.9□□□□□ -1.95
Herc1E9PZP8 AC136376.1-201ENSMUST00000228496 950 ntBASIC2.9□□□□□ -1.95
Herc1E9PZP8 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Ap3m1-206ENSMUST00000154460 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Pkd1l2-202ENSMUST00000109093 7389 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Ctnnd1-220ENSMUST00000111694 6362 ntAPPRIS P5 TSL 5 BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Thada-201ENSMUST00000047524 7884 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Gm45112-201ENSMUST00000208576 5125 ntBASIC2.9□□□□□ -1.95
Herc1E9PZP8 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
Herc1E9PZP8 AC154841.1-201ENSMUST00000227263 1479 ntBASIC2.9□□□□□ -1.95
Herc1E9PZP8 Gm43099-201ENSMUST00000198943 5241 ntBASIC2.9□□□□□ -1.95
Herc1E9PZP8 Celf1-208ENSMUST00000111455 7579 ntAPPRIS P4 TSL 5 BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Gm7853-201ENSMUST00000100708 478 ntBASIC2.9□□□□□ -1.95
Herc1E9PZP8 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Gm6900-201ENSMUST00000178971 342 ntBASIC2.9□□□□□ -1.95
Herc1E9PZP8 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Herc1E9PZP8 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Mir7022-201ENSMUST00000183749 61 ntBASIC2.9□□□□□ -1.95
Herc1E9PZP8 Gm36964-201ENSMUST00000191876 198 ntBASIC2.9□□□□□ -1.95
Herc1E9PZP8 Gm37503-201ENSMUST00000192088 319 ntBASIC2.9□□□□□ -1.95
Herc1E9PZP8 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Herc1E9PZP8 CT009480.3-201ENSMUST00000224051 3032 ntBASIC2.9□□□□□ -1.95
Herc1E9PZP8 Ctnnd1-222ENSMUST00000111696 6281 ntTSL 5 BASIC2.9□□□□□ -1.95
Herc1E9PZP8 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Baz2a-201ENSMUST00000045621 8369 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Gm26367-201ENSMUST00000104165 132 ntBASIC2.9□□□□□ -1.95
Herc1E9PZP8 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Gm5809-201ENSMUST00000121854 529 ntBASIC2.9□□□□□ -1.95
Herc1E9PZP8 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Gm42983-201ENSMUST00000199879 815 ntBASIC2.9□□□□□ -1.95
Herc1E9PZP8 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Herc1E9PZP8 Gm3978-201ENSMUST00000163406 2512 ntBASIC2.89□□□□□ -1.95
Herc1E9PZP8 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Herc1E9PZP8 Zfhx3-201ENSMUST00000043896 16433 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Herc1E9PZP8 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Herc1E9PZP8 Ank1-213ENSMUST00000141784 6566 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
Herc1E9PZP8 Dsc3-201ENSMUST00000115848 5333 ntAPPRIS ALT2 TSL 2 BASIC2.89□□□□□ -1.95
Herc1E9PZP8 Ctnnd1-219ENSMUST00000111693 6255 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
Herc1E9PZP8 Hipk1-203ENSMUST00000118317 7939 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Herc1E9PZP8 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
Herc1E9PZP8 Gm37780-201ENSMUST00000194117 1873 ntBASIC2.89□□□□□ -1.95
Herc1E9PZP8 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Herc1E9PZP8 Cmah-208ENSMUST00000224819 9482 ntBASIC2.89□□□□□ -1.95
Herc1E9PZP8 Cdh23-205ENSMUST00000105464 11090 ntAPPRIS P2 TSL 5 BASIC2.89□□□□□ -1.95
Herc1E9PZP8 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Herc1E9PZP8 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Herc1E9PZP8 Gm45477-201ENSMUST00000200213 5498 ntBASIC2.89□□□□□ -1.95
Herc1E9PZP8 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Herc1E9PZP8 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Herc1E9PZP8 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Herc1E9PZP8 Gm14739-201ENSMUST00000120424 802 ntBASIC2.89□□□□□ -1.95
Herc1E9PZP8 Gm15534-201ENSMUST00000137642 562 ntBASIC2.89□□□□□ -1.95
Herc1E9PZP8 Gm25667-201ENSMUST00000157701 275 ntBASIC2.89□□□□□ -1.95
Herc1E9PZP8 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Herc1E9PZP8 Gm26828-201ENSMUST00000180640 172 ntBASIC2.89□□□□□ -1.95
Herc1E9PZP8 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC2.89□□□□□ -1.95
Herc1E9PZP8 Gm37884-201ENSMUST00000191857 818 ntBASIC2.89□□□□□ -1.95
Herc1E9PZP8 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Herc1E9PZP8 Gm4734-201ENSMUST00000200117 777 ntBASIC2.89□□□□□ -1.95
Herc1E9PZP8 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC2.89□□□□□ -1.95
Herc1E9PZP8 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Herc1E9PZP8 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
Herc1E9PZP8 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Herc1E9PZP8 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
Herc1E9PZP8 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC2.89□□□□□ -1.95
Herc1E9PZP8 AC153143.1-201ENSMUST00000222966 1340 ntBASIC2.89□□□□□ -1.95
Herc1E9PZP8 Nlrc5-207ENSMUST00000211816 7578 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms