Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col4a6B1AVK5 Gm8221-201ENSMUST00000178052 564 ntBASIC5.42□□□□□ -1.54
Col4a6B1AVK5 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC5.42□□□□□ -1.54
Col4a6B1AVK5 Gm6828-201ENSMUST00000207902 1186 ntBASIC5.42□□□□□ -1.54
Col4a6B1AVK5 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC5.42□□□□□ -1.54
Col4a6B1AVK5 Gm45870-201ENSMUST00000211269 601 ntBASIC5.42□□□□□ -1.54
Col4a6B1AVK5 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col4a6B1AVK5 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col4a6B1AVK5 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.42□□□□□ -1.54
Col4a6B1AVK5 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col4a6B1AVK5 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col4a6B1AVK5 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col4a6B1AVK5 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC5.42□□□□□ -1.54
Col4a6B1AVK5 AC144772.2-201ENSMUST00000228830 2859 ntBASIC5.42□□□□□ -1.54
Col4a6B1AVK5 AC131667.1-201ENSMUST00000214665 2175 ntBASIC5.42□□□□□ -1.54
Col4a6B1AVK5 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col4a6B1AVK5 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col4a6B1AVK5 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.42□□□□□ -1.54
Col4a6B1AVK5 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Col4a6B1AVK5 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Col4a6B1AVK5 AC158779.2-201ENSMUST00000227902 1947 ntBASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Gm24235-201ENSMUST00000104319 129 ntBASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Gm12884-201ENSMUST00000120371 325 ntBASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Mir6416-201ENSMUST00000183664 117 ntBASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Gm4412-201ENSMUST00000186660 433 ntBASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Gm29086-201ENSMUST00000186774 222 ntBASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Gm29085-201ENSMUST00000187108 225 ntBASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Gm44412-201ENSMUST00000203018 294 ntBASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Gm44134-202ENSMUST00000204777 545 ntBASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC5.41□□□□□ -1.54
Col4a6B1AVK5 AC154623.1-201ENSMUST00000224348 805 ntBASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Nsa2-203ENSMUST00000225410 974 ntBASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Gm44695-201ENSMUST00000205567 1631 ntBASIC5.41□□□□□ -1.54
Col4a6B1AVK5 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC5.41□□□□□ -1.54
Col4a6B1AVK5 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Gm23608-201ENSMUST00000104545 128 ntBASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Gm11822-201ENSMUST00000119177 415 ntBASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Scarna10-201ENSMUST00000158992 325 ntBASIC5.4□□□□□ -1.54
Col4a6B1AVK5 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Gm8614-201ENSMUST00000182528 978 ntBASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Gm27781-201ENSMUST00000185185 92 ntBASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Gm37670-201ENSMUST00000193622 229 ntBASIC5.4□□□□□ -1.54
Col4a6B1AVK5 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Gm44603-201ENSMUST00000206820 367 ntBASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Gm3816-201ENSMUST00000209803 433 ntBASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Gm5339-201ENSMUST00000210551 1102 ntBASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Gm19186-201ENSMUST00000219922 333 ntBASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Gm37114-201ENSMUST00000195065 1804 ntBASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col4a6B1AVK5 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Col4a6B1AVK5 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Col4a6B1AVK5 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Col4a6B1AVK5 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.4□□□□□ -1.55
Col4a6B1AVK5 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms