Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Trbv9-201ENSMUST00000194494 290 ntBASIC4.41□□□□□ -1.7
Col6a4A2AX52 Gm43444-201ENSMUST00000198123 291 ntBASIC4.41□□□□□ -1.7
Col6a4A2AX52 Gm2623-201ENSMUST00000199229 286 ntBASIC4.41□□□□□ -1.7
Col6a4A2AX52 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC4.41□□□□□ -1.7
Col6a4A2AX52 Gm18205-201ENSMUST00000209215 841 ntBASIC4.41□□□□□ -1.7
Col6a4A2AX52 Gm9655-201ENSMUST00000211321 1284 ntBASIC4.41□□□□□ -1.7
Col6a4A2AX52 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Col6a4A2AX52 AC129219.1-201ENSMUST00000224336 448 ntBASIC4.41□□□□□ -1.7
Col6a4A2AX52 Gm45838-201ENSMUST00000207355 2447 ntBASIC4.41□□□□□ -1.7
Col6a4A2AX52 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Col6a4A2AX52 Gm42975-201ENSMUST00000200612 1491 ntBASIC4.41□□□□□ -1.7
Col6a4A2AX52 Gm37127-201ENSMUST00000192924 3036 ntBASIC4.41□□□□□ -1.7
Col6a4A2AX52 Gm6818-201ENSMUST00000190556 2558 ntBASIC4.41□□□□□ -1.7
Col6a4A2AX52 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col6a4A2AX52 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col6a4A2AX52 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC4.41□□□□□ -1.7
Col6a4A2AX52 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Col6a4A2AX52 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Col6a4A2AX52 Gm14628-201ENSMUST00000117508 635 ntBASIC4.41□□□□□ -1.7
Col6a4A2AX52 Gm15297-201ENSMUST00000117795 290 ntBASIC4.41□□□□□ -1.7
Col6a4A2AX52 Gm11346-201ENSMUST00000118346 704 ntBASIC4.41□□□□□ -1.7
Col6a4A2AX52 Gm25292-201ENSMUST00000122797 322 ntBASIC4.41□□□□□ -1.7
Col6a4A2AX52 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC4.41□□□□□ -1.7
Col6a4A2AX52 Gm24905-201ENSMUST00000158129 104 ntBASIC4.41□□□□□ -1.7
Col6a4A2AX52 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC4.41□□□□□ -1.7
Col6a4A2AX52 Gm37716-201ENSMUST00000193553 947 ntBASIC4.41□□□□□ -1.7
Col6a4A2AX52 Gm37670-201ENSMUST00000193622 229 ntBASIC4.41□□□□□ -1.7
Col6a4A2AX52 Gm43157-201ENSMUST00000198223 412 ntBASIC4.41□□□□□ -1.7
Col6a4A2AX52 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC4.41□□□□□ -1.7
Col6a4A2AX52 Gm43164-201ENSMUST00000202529 2128 ntBASIC4.41□□□□□ -1.7
Col6a4A2AX52 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC4.41□□□□□ -1.7
Col6a4A2AX52 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC4.41□□□□□ -1.7
Col6a4A2AX52 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
Col6a4A2AX52 Gm24763-201ENSMUST00000083688 190 ntBASIC4.41□□□□□ -1.7
Col6a4A2AX52 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col6a4A2AX52 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Col6a4A2AX52 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
Col6a4A2AX52 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Col6a4A2AX52 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC4.41□□□□□ -1.7
Col6a4A2AX52 Gm44586-201ENSMUST00000207166 2737 ntBASIC4.41□□□□□ -1.7
Col6a4A2AX52 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col6a4A2AX52 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
Col6a4A2AX52 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Col6a4A2AX52 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC4.4□□□□□ -1.7
Col6a4A2AX52 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Col6a4A2AX52 Gm37435-201ENSMUST00000192078 3947 ntBASIC4.4□□□□□ -1.7
Col6a4A2AX52 Gm23594-201ENSMUST00000104307 134 ntBASIC4.4□□□□□ -1.7
Col6a4A2AX52 Gm23608-201ENSMUST00000104545 128 ntBASIC4.4□□□□□ -1.7
Col6a4A2AX52 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Col6a4A2AX52 Gm23906-201ENSMUST00000157573 128 ntBASIC4.4□□□□□ -1.7
Col6a4A2AX52 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC4.4□□□□□ -1.7
Col6a4A2AX52 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Col6a4A2AX52 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC4.4□□□□□ -1.7
Col6a4A2AX52 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC4.4□□□□□ -1.7
Col6a4A2AX52 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC4.4□□□□□ -1.7
Col6a4A2AX52 Gm45422-201ENSMUST00000211476 246 ntBASIC4.4□□□□□ -1.7
Col6a4A2AX52 Olfr151-202ENSMUST00000221099 929 ntBASIC4.4□□□□□ -1.7
Col6a4A2AX52 CT025552.2-201ENSMUST00000225497 317 ntBASIC4.4□□□□□ -1.7
Col6a4A2AX52 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
Col6a4A2AX52 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.7
Col6a4A2AX52 Gm23508-201ENSMUST00000083079 72 ntBASIC4.4□□□□□ -1.7
Col6a4A2AX52 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Col6a4A2AX52 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
Col6a4A2AX52 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.7
Col6a4A2AX52 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
Col6a4A2AX52 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
Col6a4A2AX52 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Col6a4A2AX52 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Col6a4A2AX52 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
Col6a4A2AX52 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC4.4□□□□□ -1.7
Col6a4A2AX52 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Col6a4A2AX52 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC4.4□□□□□ -1.71
Col6a4A2AX52 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Col6a4A2AX52 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Col6a4A2AX52 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Col6a4A2AX52 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Col6a4A2AX52 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Col6a4A2AX52 Gm42658-201ENSMUST00000197199 1575 ntBASIC4.4□□□□□ -1.71
Col6a4A2AX52 Gm7416-201ENSMUST00000117448 1487 ntBASIC4.4□□□□□ -1.71
Col6a4A2AX52 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Col6a4A2AX52 Gm24350-201ENSMUST00000104163 133 ntBASIC4.4□□□□□ -1.71
Col6a4A2AX52 Gm12328-201ENSMUST00000118611 197 ntBASIC4.4□□□□□ -1.71
Col6a4A2AX52 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC4.4□□□□□ -1.71
Col6a4A2AX52 Gm5405-201ENSMUST00000120478 609 ntBASIC4.4□□□□□ -1.71
Col6a4A2AX52 Gm12322-201ENSMUST00000121605 389 ntBASIC4.4□□□□□ -1.71
Col6a4A2AX52 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Col6a4A2AX52 Gm26098-201ENSMUST00000157247 288 ntBASIC4.4□□□□□ -1.71
Col6a4A2AX52 Zakit-201ENSMUST00000157677 308 ntBASIC4.4□□□□□ -1.71
Col6a4A2AX52 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC4.4□□□□□ -1.71
Col6a4A2AX52 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Col6a4A2AX52 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Col6a4A2AX52 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Col6a4A2AX52 Gm6047-201ENSMUST00000167221 574 ntBASIC4.4□□□□□ -1.71
Col6a4A2AX52 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Col6a4A2AX52 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Col6a4A2AX52 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Col6a4A2AX52 Gm6155-201ENSMUST00000173735 341 ntBASIC4.4□□□□□ -1.71
Col6a4A2AX52 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Col6a4A2AX52 Gm45209-201ENSMUST00000207122 353 ntBASIC4.4□□□□□ -1.71
Col6a4A2AX52 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms