Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC5.8□□□□□ -1.48
Scn3aA2ASI5 AC096628.1-201ENSMUST00000226060 641 ntBASIC5.8□□□□□ -1.48
Scn3aA2ASI5 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Scn3aA2ASI5 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Scn3aA2ASI5 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Scn3aA2ASI5 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Scn3aA2ASI5 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Scn3aA2ASI5 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Scn3aA2ASI5 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Scn3aA2ASI5 Gm43283-201ENSMUST00000199138 2548 ntBASIC5.8□□□□□ -1.48
Scn3aA2ASI5 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.8□□□□□ -1.48
Scn3aA2ASI5 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Scn3aA2ASI5 Gm12131-201ENSMUST00000117479 359 ntBASIC5.8□□□□□ -1.48
Scn3aA2ASI5 Gm12423-201ENSMUST00000118334 135 ntBASIC5.8□□□□□ -1.48
Scn3aA2ASI5 Gm11790-201ENSMUST00000119569 455 ntBASIC5.8□□□□□ -1.48
Scn3aA2ASI5 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC5.8□□□□□ -1.48
Scn3aA2ASI5 Gm26153-201ENSMUST00000157433 127 ntBASIC5.8□□□□□ -1.48
Scn3aA2ASI5 AC132384.8-201ENSMUST00000218152 1204 ntBASIC5.8□□□□□ -1.48
Scn3aA2ASI5 Gm18601-201ENSMUST00000220831 634 ntBASIC5.8□□□□□ -1.48
Scn3aA2ASI5 AC154623.1-201ENSMUST00000224348 805 ntBASIC5.8□□□□□ -1.48
Scn3aA2ASI5 AC121978.1-201ENSMUST00000228357 380 ntBASIC5.8□□□□□ -1.48
Scn3aA2ASI5 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.8□□□□□ -1.48
Scn3aA2ASI5 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Scn3aA2ASI5 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Scn3aA2ASI5 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Scn3aA2ASI5 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
Scn3aA2ASI5 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Scn3aA2ASI5 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Scn3aA2ASI5 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.79□□□□□ -1.48
Scn3aA2ASI5 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Scn3aA2ASI5 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Scn3aA2ASI5 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
Scn3aA2ASI5 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Scn3aA2ASI5 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Scn3aA2ASI5 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5.79□□□□□ -1.48
Scn3aA2ASI5 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Scn3aA2ASI5 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Scn3aA2ASI5 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Scn3aA2ASI5 Gm6906-201ENSMUST00000218014 569 ntBASIC5.79□□□□□ -1.48
Scn3aA2ASI5 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.79□□□□□ -1.48
Scn3aA2ASI5 Gm23626-201ENSMUST00000082458 133 ntBASIC5.79□□□□□ -1.48
Scn3aA2ASI5 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Scn3aA2ASI5 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Scn3aA2ASI5 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Scn3aA2ASI5 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Scn3aA2ASI5 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Scn3aA2ASI5 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Scn3aA2ASI5 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
Scn3aA2ASI5 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Scn3aA2ASI5 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Scn3aA2ASI5 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Scn3aA2ASI5 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.78□□□□□ -1.48
Scn3aA2ASI5 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Scn3aA2ASI5 Gm24170-201ENSMUST00000104124 133 ntBASIC5.78□□□□□ -1.48
Scn3aA2ASI5 Gm9085-201ENSMUST00000119994 1072 ntBASIC5.78□□□□□ -1.48
Scn3aA2ASI5 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Scn3aA2ASI5 Gm27551-201ENSMUST00000184258 77 ntBASIC5.78□□□□□ -1.48
Scn3aA2ASI5 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC5.78□□□□□ -1.48
Scn3aA2ASI5 Gm44259-201ENSMUST00000204996 298 ntBASIC5.78□□□□□ -1.48
Scn3aA2ASI5 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC5.78□□□□□ -1.48
Scn3aA2ASI5 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Scn3aA2ASI5 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Scn3aA2ASI5 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Scn3aA2ASI5 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Scn3aA2ASI5 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Scn3aA2ASI5 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Scn3aA2ASI5 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.78□□□□□ -1.48
Scn3aA2ASI5 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC5.78□□□□□ -1.48
Scn3aA2ASI5 Gm25096-201ENSMUST00000104043 129 ntBASIC5.78□□□□□ -1.48
Scn3aA2ASI5 Gm12444-201ENSMUST00000121512 877 ntBASIC5.78□□□□□ -1.48
Scn3aA2ASI5 Gm23837-201ENSMUST00000122656 286 ntBASIC5.78□□□□□ -1.48
Scn3aA2ASI5 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Scn3aA2ASI5 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC5.78□□□□□ -1.48
Scn3aA2ASI5 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Scn3aA2ASI5 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Scn3aA2ASI5 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC5.77□□□□□ -1.49
Scn3aA2ASI5 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Scn3aA2ASI5 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
Scn3aA2ASI5 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Scn3aA2ASI5 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC5.77□□□□□ -1.49
Scn3aA2ASI5 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Scn3aA2ASI5 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Scn3aA2ASI5 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
Scn3aA2ASI5 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Scn3aA2ASI5 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.77□□□□□ -1.49
Scn3aA2ASI5 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.77□□□□□ -1.49
Scn3aA2ASI5 Gm12281-201ENSMUST00000119536 298 ntBASIC5.77□□□□□ -1.49
Scn3aA2ASI5 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC5.77□□□□□ -1.49
Scn3aA2ASI5 Gm16259-201ENSMUST00000145241 553 ntBASIC5.77□□□□□ -1.49
Scn3aA2ASI5 Gm26310-201ENSMUST00000157766 117 ntBASIC5.77□□□□□ -1.49
Scn3aA2ASI5 Gm22312-201ENSMUST00000158005 130 ntBASIC5.77□□□□□ -1.49
Scn3aA2ASI5 Gm5777-201ENSMUST00000177265 448 ntBASIC5.77□□□□□ -1.49
Scn3aA2ASI5 Gm43929-201ENSMUST00000203025 409 ntBASIC5.77□□□□□ -1.49
Scn3aA2ASI5 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC5.77□□□□□ -1.49
Scn3aA2ASI5 Gm25260-201ENSMUST00000083053 134 ntBASIC5.77□□□□□ -1.49
Scn3aA2ASI5 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.77□□□□□ -1.49
Scn3aA2ASI5 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Scn3aA2ASI5 Gm37205-201ENSMUST00000194820 2736 ntBASIC5.77□□□□□ -1.49
Scn3aA2ASI5 AC117608.2-201ENSMUST00000224124 1363 ntBASIC5.77□□□□□ -1.49
Scn3aA2ASI5 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms