Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Scn1aA2APX8 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Scn1aA2APX8 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Scn1aA2APX8 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC5.42□□□□□ -1.54
Scn1aA2APX8 Gm25419-201ENSMUST00000104215 191 ntBASIC5.42□□□□□ -1.54
Scn1aA2APX8 Gm14086-201ENSMUST00000117152 173 ntBASIC5.42□□□□□ -1.54
Scn1aA2APX8 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC5.42□□□□□ -1.54
Scn1aA2APX8 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC5.42□□□□□ -1.54
Scn1aA2APX8 Gm16259-201ENSMUST00000145241 553 ntBASIC5.42□□□□□ -1.54
Scn1aA2APX8 Gm3053-201ENSMUST00000161709 616 ntBASIC5.42□□□□□ -1.54
Scn1aA2APX8 Gm27820-201ENSMUST00000183628 175 ntBASIC5.42□□□□□ -1.54
Scn1aA2APX8 Gm2497-201ENSMUST00000189539 601 ntBASIC5.42□□□□□ -1.54
Scn1aA2APX8 Gm18864-201ENSMUST00000194518 1051 ntBASIC5.42□□□□□ -1.54
Scn1aA2APX8 Trav3-2-201ENSMUST00000198999 305 ntBASIC5.42□□□□□ -1.54
Scn1aA2APX8 Anxa13-202ENSMUST00000227274 1201 ntBASIC5.42□□□□□ -1.54
Scn1aA2APX8 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Scn1aA2APX8 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Scn1aA2APX8 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Scn1aA2APX8 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Scn1aA2APX8 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
Scn1aA2APX8 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
Scn1aA2APX8 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Scn1aA2APX8 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Scn1aA2APX8 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Scn1aA2APX8 Gm37717-201ENSMUST00000192647 3027 ntBASIC5.42□□□□□ -1.54
Scn1aA2APX8 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.42□□□□□ -1.54
Scn1aA2APX8 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Scn1aA2APX8 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.42□□□□□ -1.54
Scn1aA2APX8 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Scn1aA2APX8 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Scn1aA2APX8 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC5.41□□□□□ -1.54
Scn1aA2APX8 Gm13007-201ENSMUST00000121866 365 ntBASIC5.41□□□□□ -1.54
Scn1aA2APX8 Gm23327-201ENSMUST00000157420 78 ntBASIC5.41□□□□□ -1.54
Scn1aA2APX8 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Scn1aA2APX8 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Scn1aA2APX8 Desi2-202ENSMUST00000069568 1193 ntBASIC5.41□□□□□ -1.54
Scn1aA2APX8 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Scn1aA2APX8 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.41□□□□□ -1.54
Scn1aA2APX8 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
Scn1aA2APX8 Gm43577-201ENSMUST00000197090 3344 ntBASIC5.41□□□□□ -1.54
Scn1aA2APX8 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Scn1aA2APX8 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Scn1aA2APX8 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Scn1aA2APX8 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC5.41□□□□□ -1.54
Scn1aA2APX8 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Scn1aA2APX8 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Scn1aA2APX8 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
Scn1aA2APX8 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Scn1aA2APX8 Gm24789-201ENSMUST00000104282 131 ntBASIC5.41□□□□□ -1.54
Scn1aA2APX8 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.41□□□□□ -1.54
Scn1aA2APX8 Gm3267-201ENSMUST00000118671 473 ntBASIC5.41□□□□□ -1.54
Scn1aA2APX8 Gm15390-201ENSMUST00000120323 738 ntBASIC5.41□□□□□ -1.54
Scn1aA2APX8 Defa-ps14-201ENSMUST00000121373 418 ntBASIC5.41□□□□□ -1.54
Scn1aA2APX8 Gm23837-201ENSMUST00000122656 286 ntBASIC5.41□□□□□ -1.54
Scn1aA2APX8 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC5.41□□□□□ -1.54
Scn1aA2APX8 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC5.41□□□□□ -1.54
Scn1aA2APX8 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Scn1aA2APX8 AC152979.3-201ENSMUST00000217720 479 ntBASIC5.41□□□□□ -1.54
Scn1aA2APX8 Gm7040-201ENSMUST00000223271 443 ntBASIC5.41□□□□□ -1.54
Scn1aA2APX8 Prl7a1-203ENSMUST00000224852 1283 ntBASIC5.41□□□□□ -1.54
Scn1aA2APX8 AC125539.2-202ENSMUST00000227983 587 ntBASIC5.41□□□□□ -1.54
Scn1aA2APX8 AC125539.2-201ENSMUST00000228339 753 ntBASIC5.41□□□□□ -1.54
Scn1aA2APX8 CT030238.1-201ENSMUST00000228393 442 ntBASIC5.41□□□□□ -1.54
Scn1aA2APX8 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Scn1aA2APX8 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Scn1aA2APX8 Olfr654-201ENSMUST00000098173 1155 ntBASIC5.41□□□□□ -1.54
Scn1aA2APX8 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5.41□□□□□ -1.54
Scn1aA2APX8 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Scn1aA2APX8 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Scn1aA2APX8 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Scn1aA2APX8 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Scn1aA2APX8 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Scn1aA2APX8 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.4□□□□□ -1.54
Scn1aA2APX8 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Scn1aA2APX8 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
Scn1aA2APX8 Gm44584-201ENSMUST00000208395 2880 ntBASIC5.4□□□□□ -1.54
Scn1aA2APX8 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC5.4□□□□□ -1.54
Scn1aA2APX8 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Scn1aA2APX8 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Scn1aA2APX8 Gm22355-201ENSMUST00000175531 96 ntBASIC5.4□□□□□ -1.54
Scn1aA2APX8 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Scn1aA2APX8 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Scn1aA2APX8 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Scn1aA2APX8 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC5.4□□□□□ -1.54
Scn1aA2APX8 AC152169.2-201ENSMUST00000224558 613 ntBASIC5.4□□□□□ -1.54
Scn1aA2APX8 AC121978.1-201ENSMUST00000228357 380 ntBASIC5.4□□□□□ -1.54
Scn1aA2APX8 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Scn1aA2APX8 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Scn1aA2APX8 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Scn1aA2APX8 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
Scn1aA2APX8 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.4□□□□□ -1.54
Scn1aA2APX8 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Scn1aA2APX8 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Scn1aA2APX8 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.4□□□□□ -1.54
Scn1aA2APX8 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Scn1aA2APX8 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Scn1aA2APX8 AC131329.1-201ENSMUST00000221204 3487 ntBASIC5.4□□□□□ -1.54
Scn1aA2APX8 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Scn1aA2APX8 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Scn1aA2APX8 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms