Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm8929-201ENSMUST00000197781 1132 ntBASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Gm6520-201ENSMUST00000200636 410 ntBASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Gm44580-201ENSMUST00000206333 877 ntBASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Gm45249-201ENSMUST00000211021 348 ntBASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Gm8911-201ENSMUST00000213986 652 ntBASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Gm46192-201ENSMUST00000217894 326 ntBASIC5.1□□□□□ -1.59
Trim3Q9R1R2 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 AC174797.2-203ENSMUST00000224017 716 ntBASIC5.1□□□□□ -1.59
Trim3Q9R1R2 AC192333.6-201ENSMUST00000224565 725 ntBASIC5.1□□□□□ -1.59
Trim3Q9R1R2 AC122858.1-201ENSMUST00000226212 433 ntBASIC5.1□□□□□ -1.59
Trim3Q9R1R2 AC122858.3-201ENSMUST00000226341 740 ntBASIC5.1□□□□□ -1.59
Trim3Q9R1R2 AC122858.1-202ENSMUST00000228290 986 ntBASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Trim3Q9R1R2 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Gm37092-201ENSMUST00000193381 1518 ntBASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Gm24265-201ENSMUST00000101833 141 ntBASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Mir466j-201ENSMUST00000116876 122 ntBASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Gm4853-201ENSMUST00000119359 394 ntBASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Gm14472-201ENSMUST00000119815 282 ntBASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Gm12110-201ENSMUST00000121601 579 ntBASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Gm8061-201ENSMUST00000122380 350 ntBASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Gm22122-201ENSMUST00000175147 200 ntBASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Gm24407-201ENSMUST00000177864 141 ntBASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Gm8282-201ENSMUST00000187559 483 ntBASIC5.09□□□□□ -1.59
Trim3Q9R1R2 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Gm28507-201ENSMUST00000189737 703 ntBASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Gm37336-202ENSMUST00000193705 468 ntBASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Gm37973-201ENSMUST00000195767 1289 ntBASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Gm42824-201ENSMUST00000199361 247 ntBASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Gm6649-201ENSMUST00000199743 1165 ntBASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Gm8039-201ENSMUST00000204758 712 ntBASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Gm19174-201ENSMUST00000216944 956 ntBASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Mir7-2-201ENSMUST00000083675 97 ntBASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Gm45177-201ENSMUST00000209104 2307 ntBASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Gm38029-201ENSMUST00000192669 2090 ntBASIC5.09□□□□□ -1.59
Trim3Q9R1R2 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Trim3Q9R1R2 Gm19552-201ENSMUST00000194744 2833 ntBASIC5.09□□□□□ -1.6
Trim3Q9R1R2 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Trim3Q9R1R2 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Trim3Q9R1R2 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
Trim3Q9R1R2 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
Trim3Q9R1R2 Gm38387-201ENSMUST00000191945 2577 ntBASIC5.09□□□□□ -1.6
Trim3Q9R1R2 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.08□□□□□ -1.6
Trim3Q9R1R2 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms