Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 AC134537.2-201ENSMUST00000217770 575 ntBASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.02□□□□□ -1.61
Cdc40Q9DC48 AC161884.2-201ENSMUST00000224513 227 ntBASIC5.02□□□□□ -1.61
Cdc40Q9DC48 AC129085.4-201ENSMUST00000224536 570 ntBASIC5.02□□□□□ -1.61
Cdc40Q9DC48 AC192088.3-201ENSMUST00000227858 831 ntBASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.02□□□□□ -1.61
Cdc40Q9DC48 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Cdc40Q9DC48 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Gm44695-201ENSMUST00000205567 1631 ntBASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Gm45172-201ENSMUST00000206054 1301 ntBASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.01□□□□□ -1.61
Cdc40Q9DC48 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Gm13590-201ENSMUST00000120183 1588 ntBASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Gm6134-201ENSMUST00000117265 171 ntBASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Gm13488-201ENSMUST00000120419 179 ntBASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Gm14620-201ENSMUST00000120656 383 ntBASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Gm12731-201ENSMUST00000120932 268 ntBASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Gm11894-201ENSMUST00000121579 328 ntBASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Gm11197-201ENSMUST00000145158 839 ntBASIC5.01□□□□□ -1.61
Cdc40Q9DC48 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Gm7335-201ENSMUST00000172475 373 ntBASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Gm17907-201ENSMUST00000173150 710 ntBASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Gm22411-201ENSMUST00000175462 126 ntBASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Gm22002-201ENSMUST00000175622 125 ntBASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Gm5139-201ENSMUST00000175943 249 ntBASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Mir6903-201ENSMUST00000183597 88 ntBASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Gm8669-201ENSMUST00000183839 945 ntBASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Gm42437-201ENSMUST00000197263 923 ntBASIC5.01□□□□□ -1.61
Cdc40Q9DC48 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Gm4587-201ENSMUST00000209135 637 ntBASIC5.01□□□□□ -1.61
Cdc40Q9DC48 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Gm45722-201ENSMUST00000213075 466 ntBASIC5.01□□□□□ -1.61
Cdc40Q9DC48 AC151971.3-201ENSMUST00000214694 404 ntBASIC5.01□□□□□ -1.61
Cdc40Q9DC48 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.01□□□□□ -1.61
Cdc40Q9DC48 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC5.01□□□□□ -1.61
Cdc40Q9DC48 AC162183.1-202ENSMUST00000225434 904 ntBASIC5.01□□□□□ -1.61
Cdc40Q9DC48 AC154846.2-201ENSMUST00000228805 424 ntBASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Clec2j-201ENSMUST00000032517 515 ntBASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC5.01□□□□□ -1.61
Cdc40Q9DC48 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Gm42583-201ENSMUST00000202678 6700 ntBASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Cdc40Q9DC48 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC5□□□□□ -1.61
Cdc40Q9DC48 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5□□□□□ -1.61
Cdc40Q9DC48 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Cdc40Q9DC48 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Cdc40Q9DC48 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Cdc40Q9DC48 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC5□□□□□ -1.61
Cdc40Q9DC48 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC5□□□□□ -1.61
Cdc40Q9DC48 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
Cdc40Q9DC48 Gm37018-201ENSMUST00000192441 3869 ntBASIC5□□□□□ -1.61
Cdc40Q9DC48 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC5□□□□□ -1.61
Cdc40Q9DC48 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5□□□□□ -1.61
Cdc40Q9DC48 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
Cdc40Q9DC48 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 94.7 ms