Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm27030-201ENSMUST00000182551 464 ntBASIC5.5□□□□□ -1.53
Msh4Q99MT2 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC5.5□□□□□ -1.53
Msh4Q99MT2 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC5.5□□□□□ -1.53
Msh4Q99MT2 Gm38131-201ENSMUST00000192449 430 ntBASIC5.5□□□□□ -1.53
Msh4Q99MT2 Gm18843-201ENSMUST00000194982 719 ntBASIC5.5□□□□□ -1.53
Msh4Q99MT2 Igkv4-75-201ENSMUST00000197204 359 ntBASIC5.5□□□□□ -1.53
Msh4Q99MT2 Gm44403-201ENSMUST00000198554 129 ntBASIC5.5□□□□□ -1.53
Msh4Q99MT2 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC5.5□□□□□ -1.53
Msh4Q99MT2 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Msh4Q99MT2 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC5.5□□□□□ -1.53
Msh4Q99MT2 Gm7443-201ENSMUST00000206355 378 ntBASIC5.5□□□□□ -1.53
Msh4Q99MT2 Gm17988-201ENSMUST00000208796 535 ntBASIC5.5□□□□□ -1.53
Msh4Q99MT2 Gm45596-201ENSMUST00000209279 434 ntBASIC5.5□□□□□ -1.53
Msh4Q99MT2 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC5.5□□□□□ -1.53
Msh4Q99MT2 AC153544.1-201ENSMUST00000217988 400 ntBASIC5.5□□□□□ -1.53
Msh4Q99MT2 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Msh4Q99MT2 AC154556.1-201ENSMUST00000224587 885 ntBASIC5.5□□□□□ -1.53
Msh4Q99MT2 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.5□□□□□ -1.53
Msh4Q99MT2 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Msh4Q99MT2 Gm16335-201ENSMUST00000077495 309 ntBASIC5.5□□□□□ -1.53
Msh4Q99MT2 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC5.5□□□□□ -1.53
Msh4Q99MT2 Gm10794-201ENSMUST00000099624 207 ntBASIC5.5□□□□□ -1.53
Msh4Q99MT2 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Msh4Q99MT2 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Msh4Q99MT2 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Msh4Q99MT2 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
Msh4Q99MT2 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Msh4Q99MT2 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Msh4Q99MT2 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Msh4Q99MT2 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Msh4Q99MT2 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Msh4Q99MT2 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Msh4Q99MT2 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC5.5□□□□□ -1.53
Msh4Q99MT2 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Msh4Q99MT2 Gm12586-201ENSMUST00000117328 1316 ntBASIC5.49□□□□□ -1.53
Msh4Q99MT2 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Msh4Q99MT2 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Msh4Q99MT2 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
Msh4Q99MT2 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Msh4Q99MT2 Gm18300-201ENSMUST00000192792 1406 ntBASIC5.49□□□□□ -1.53
Msh4Q99MT2 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Msh4Q99MT2 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Msh4Q99MT2 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
Msh4Q99MT2 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Msh4Q99MT2 Gm43627-201ENSMUST00000197119 2299 ntBASIC5.49□□□□□ -1.53
Msh4Q99MT2 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Msh4Q99MT2 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Msh4Q99MT2 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Msh4Q99MT2 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC5.49□□□□□ -1.53
Msh4Q99MT2 Gm15660-201ENSMUST00000118997 478 ntBASIC5.49□□□□□ -1.53
Msh4Q99MT2 Gm15238-201ENSMUST00000119938 1296 ntBASIC5.49□□□□□ -1.53
Msh4Q99MT2 Gm12587-201ENSMUST00000120180 427 ntBASIC5.49□□□□□ -1.53
Msh4Q99MT2 Gm15877-201ENSMUST00000121897 964 ntBASIC5.49□□□□□ -1.53
Msh4Q99MT2 Gm11233-201ENSMUST00000122357 634 ntBASIC5.49□□□□□ -1.53
Msh4Q99MT2 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Msh4Q99MT2 Gm16129-201ENSMUST00000152628 486 ntBASIC5.49□□□□□ -1.53
Msh4Q99MT2 Gm24395-201ENSMUST00000158139 125 ntBASIC5.49□□□□□ -1.53
Msh4Q99MT2 Gm26169-201ENSMUST00000158420 135 ntBASIC5.49□□□□□ -1.53
Msh4Q99MT2 Gm25363-201ENSMUST00000158850 245 ntBASIC5.49□□□□□ -1.53
Msh4Q99MT2 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Msh4Q99MT2 Gm27854-201ENSMUST00000175578 244 ntBASIC5.49□□□□□ -1.53
Msh4Q99MT2 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Msh4Q99MT2 Gm27960-201ENSMUST00000183445 184 ntBASIC5.49□□□□□ -1.53
Msh4Q99MT2 Gm8419-201ENSMUST00000189886 412 ntBASIC5.49□□□□□ -1.53
Msh4Q99MT2 Gm37235-201ENSMUST00000195171 59 ntBASIC5.49□□□□□ -1.53
Msh4Q99MT2 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC5.49□□□□□ -1.53
Msh4Q99MT2 Mir6906-201ENSMUST00000198998 58 ntBASIC5.49□□□□□ -1.53
Msh4Q99MT2 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC5.49□□□□□ -1.53
Msh4Q99MT2 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC5.49□□□□□ -1.53
Msh4Q99MT2 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Msh4Q99MT2 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC5.49□□□□□ -1.53
Msh4Q99MT2 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC5.49□□□□□ -1.53
Msh4Q99MT2 AC124445.1-201ENSMUST00000218613 452 ntBASIC5.49□□□□□ -1.53
Msh4Q99MT2 CT030170.4-202ENSMUST00000221109 540 ntBASIC5.49□□□□□ -1.53
Msh4Q99MT2 AC134254.2-201ENSMUST00000221262 170 ntBASIC5.49□□□□□ -1.53
Msh4Q99MT2 AC133203.2-201ENSMUST00000226709 464 ntBASIC5.49□□□□□ -1.53
Msh4Q99MT2 AC156016.5-201ENSMUST00000228742 355 ntBASIC5.49□□□□□ -1.53
Msh4Q99MT2 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Msh4Q99MT2 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Msh4Q99MT2 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Msh4Q99MT2 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Msh4Q99MT2 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Msh4Q99MT2 Gm37789-201ENSMUST00000192862 2889 ntBASIC5.49□□□□□ -1.53
Msh4Q99MT2 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.48□□□□□ -1.53
Msh4Q99MT2 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Msh4Q99MT2 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Msh4Q99MT2 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Msh4Q99MT2 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 Gm37482-201ENSMUST00000194899 2791 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Msh4Q99MT2 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Msh4Q99MT2 AC121997.2-201ENSMUST00000228095 2294 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Msh4Q99MT2 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Msh4Q99MT2 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Msh4Q99MT2 Gm23692-201ENSMUST00000101881 160 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 Gm22370-201ENSMUST00000102422 83 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 Gm24340-201ENSMUST00000104208 97 ntBASIC5.48□□□□□ -1.53
Msh4Q99MT2 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Msh4Q99MT2 Mup-ps16-201ENSMUST00000120085 596 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms