Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Gm11484-201ENSMUST00000119808 338 ntBASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Gm26489-201ENSMUST00000157880 264 ntBASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Gm23662-201ENSMUST00000158046 111 ntBASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Gm27653-201ENSMUST00000185037 136 ntBASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Gm2147-201ENSMUST00000193588 639 ntBASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Igkv4-75-201ENSMUST00000197204 359 ntBASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Gm8189-203ENSMUST00000211159 1225 ntBASIC5.12□□□□□ -1.59
Lsm1Q8VC85 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 AC153548.2-201ENSMUST00000219770 885 ntBASIC5.12□□□□□ -1.59
Lsm1Q8VC85 AC158633.1-201ENSMUST00000219892 649 ntBASIC5.12□□□□□ -1.59
Lsm1Q8VC85 AC102139.1-201ENSMUST00000227000 251 ntBASIC5.12□□□□□ -1.59
Lsm1Q8VC85 AC154806.3-201ENSMUST00000227376 439 ntBASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Gm8526-201ENSMUST00000079153 475 ntBASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Gm22456-201ENSMUST00000082578 125 ntBASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Smc5-206ENSMUST00000226111 3265 ntBASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Gm45172-201ENSMUST00000206054 1301 ntBASIC5.12□□□□□ -1.59
Lsm1Q8VC85 AC151904.4-201ENSMUST00000219868 1319 ntBASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Lsm1Q8VC85 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Lsm1Q8VC85 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Gm14938-201ENSMUST00000119482 943 ntBASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Gm13259-201ENSMUST00000120792 456 ntBASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Gm25459-201ENSMUST00000157953 114 ntBASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Gm23354-201ENSMUST00000158426 104 ntBASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Gm24175-201ENSMUST00000158931 129 ntBASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Gm18199-201ENSMUST00000173820 835 ntBASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Gm18177-201ENSMUST00000188373 404 ntBASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Gm37492-201ENSMUST00000191948 376 ntBASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Gm18717-201ENSMUST00000192744 1241 ntBASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Gm42522-201ENSMUST00000196071 255 ntBASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Gm8920-201ENSMUST00000196153 924 ntBASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Gm3912-203ENSMUST00000211024 367 ntBASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Gm18587-201ENSMUST00000213736 841 ntBASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC5.11□□□□□ -1.59
Lsm1Q8VC85 AC165260.4-201ENSMUST00000225924 724 ntBASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Gm16335-201ENSMUST00000077495 309 ntBASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.11□□□□□ -1.59
Lsm1Q8VC85 AC115760.1-201ENSMUST00000225160 1327 ntBASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Lsm1Q8VC85 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms