Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc9Q8VC31 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Gm28359-201ENSMUST00000187470 1322 ntBASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 AC159326.1-201ENSMUST00000219989 1302 ntBASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Gm6162-201ENSMUST00000194870 2930 ntBASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Mir669o-201ENSMUST00000103898 96 ntBASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Gm25346-201ENSMUST00000104509 128 ntBASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Gm12261-201ENSMUST00000117499 645 ntBASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Gm12656-201ENSMUST00000118149 577 ntBASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Gm12413-201ENSMUST00000121508 312 ntBASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Gm6977-201ENSMUST00000121568 512 ntBASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Gm26170-201ENSMUST00000158419 148 ntBASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Gm21614-201ENSMUST00000183260 1005 ntBASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Mir6989-201ENSMUST00000184812 65 ntBASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Gm36966-201ENSMUST00000192217 413 ntBASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Gm37213-201ENSMUST00000193077 586 ntBASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Gm37336-202ENSMUST00000193705 468 ntBASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Gm44376-201ENSMUST00000197570 128 ntBASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Gm45473-201ENSMUST00000211452 616 ntBASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Gm45448-201ENSMUST00000211739 209 ntBASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 AC123944.2-201ENSMUST00000215290 382 ntBASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 AC153932.1-201ENSMUST00000218558 787 ntBASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 CT030238.4-203ENSMUST00000227343 836 ntBASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC6.52□□□□□ -1.37
Ccdc9Q8VC31 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Gm13770-201ENSMUST00000117149 305 ntBASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Gm13176-201ENSMUST00000117910 477 ntBASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Gm15012-201ENSMUST00000119176 106 ntBASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Gm12820-201ENSMUST00000119233 342 ntBASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Gm14115-201ENSMUST00000119242 482 ntBASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Gm12307-201ENSMUST00000120581 590 ntBASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Rps29-ps-201ENSMUST00000122083 172 ntBASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Gm11233-201ENSMUST00000122357 634 ntBASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Gm16285-201ENSMUST00000162999 347 ntBASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Gm17063-201ENSMUST00000168135 456 ntBASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Gm5947-201ENSMUST00000179156 714 ntBASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Gm5645-201ENSMUST00000179597 714 ntBASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Gm5260-201ENSMUST00000186157 949 ntBASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Gm29663-201ENSMUST00000186962 853 ntBASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Gm1969-201ENSMUST00000198125 1220 ntBASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 AC142273.1-201ENSMUST00000213723 673 ntBASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Gm5831-201ENSMUST00000216016 1209 ntBASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Gm7413-201ENSMUST00000219498 462 ntBASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 AL671874.1-201ENSMUST00000223746 1123 ntBASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 AC164302.1-201ENSMUST00000227036 433 ntBASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC6.51□□□□□ -1.37
Ccdc9Q8VC31 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms