Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Clrn1Q8K445 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.72□□□□□ -1.49
Clrn1Q8K445 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Clrn1Q8K445 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Clrn1Q8K445 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Clrn1Q8K445 Gm11845-201ENSMUST00000117886 327 ntBASIC5.72□□□□□ -1.49
Clrn1Q8K445 Gm14930-201ENSMUST00000118864 652 ntBASIC5.72□□□□□ -1.49
Clrn1Q8K445 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC5.72□□□□□ -1.49
Clrn1Q8K445 Gm15141-201ENSMUST00000121860 729 ntBASIC5.72□□□□□ -1.49
Clrn1Q8K445 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC5.72□□□□□ -1.49
Clrn1Q8K445 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC5.72□□□□□ -1.49
Clrn1Q8K445 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC5.72□□□□□ -1.49
Clrn1Q8K445 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC5.72□□□□□ -1.49
Clrn1Q8K445 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Clrn1Q8K445 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Clrn1Q8K445 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC5.72□□□□□ -1.49
Clrn1Q8K445 Gm22701-201ENSMUST00000175371 291 ntBASIC5.72□□□□□ -1.49
Clrn1Q8K445 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC5.72□□□□□ -1.49
Clrn1Q8K445 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC5.72□□□□□ -1.49
Clrn1Q8K445 Gm29641-201ENSMUST00000188955 259 ntBASIC5.72□□□□□ -1.49
Clrn1Q8K445 Gm28190-201ENSMUST00000189766 722 ntBASIC5.72□□□□□ -1.49
Clrn1Q8K445 Gm29551-201ENSMUST00000190913 698 ntBASIC5.72□□□□□ -1.49
Clrn1Q8K445 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Clrn1Q8K445 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Clrn1Q8K445 Igkv4-73-201ENSMUST00000199760 358 ntBASIC5.72□□□□□ -1.49
Clrn1Q8K445 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC5.72□□□□□ -1.49
Clrn1Q8K445 Gm5318-201ENSMUST00000205249 406 ntBASIC5.72□□□□□ -1.49
Clrn1Q8K445 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC5.72□□□□□ -1.49
Clrn1Q8K445 Gm17992-201ENSMUST00000207346 1072 ntBASIC5.72□□□□□ -1.49
Clrn1Q8K445 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC5.72□□□□□ -1.49
Clrn1Q8K445 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC5.72□□□□□ -1.49
Clrn1Q8K445 AC116465.1-201ENSMUST00000220324 235 ntBASIC5.72□□□□□ -1.49
Clrn1Q8K445 Gm7045-201ENSMUST00000221466 605 ntBASIC5.72□□□□□ -1.49
Clrn1Q8K445 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Clrn1Q8K445 Gm9292-201ENSMUST00000222008 710 ntBASIC5.72□□□□□ -1.49
Clrn1Q8K445 AC154795.1-201ENSMUST00000225611 364 ntBASIC5.72□□□□□ -1.49
Clrn1Q8K445 AC117814.1-201ENSMUST00000226135 352 ntBASIC5.72□□□□□ -1.49
Clrn1Q8K445 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Clrn1Q8K445 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Clrn1Q8K445 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Clrn1Q8K445 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Clrn1Q8K445 Gm10794-201ENSMUST00000099624 207 ntBASIC5.72□□□□□ -1.49
Clrn1Q8K445 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Clrn1Q8K445 Gm44043-201ENSMUST00000203426 3253 ntBASIC5.72□□□□□ -1.49
Clrn1Q8K445 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Clrn1Q8K445 AC122263.1-201ENSMUST00000228636 2805 ntBASIC5.72□□□□□ -1.49
Clrn1Q8K445 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Clrn1Q8K445 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC5.72□□□□□ -1.49
Clrn1Q8K445 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.72□□□□□ -1.49
Clrn1Q8K445 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC5.72□□□□□ -1.49
Clrn1Q8K445 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Clrn1Q8K445 Gm43874-201ENSMUST00000204853 2798 ntBASIC5.72□□□□□ -1.49
Clrn1Q8K445 Gm43369-201ENSMUST00000196373 1552 ntBASIC5.72□□□□□ -1.49
Clrn1Q8K445 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC5.72□□□□□ -1.49
Clrn1Q8K445 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Clrn1Q8K445 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Clrn1Q8K445 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC5.71□□□□□ -1.49
Clrn1Q8K445 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
Clrn1Q8K445 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Clrn1Q8K445 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.49
Clrn1Q8K445 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Clrn1Q8K445 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Clrn1Q8K445 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Clrn1Q8K445 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Clrn1Q8K445 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Clrn1Q8K445 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Clrn1Q8K445 Gm25795-201ENSMUST00000104421 132 ntBASIC5.71□□□□□ -1.5
Clrn1Q8K445 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Clrn1Q8K445 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC5.71□□□□□ -1.5
Clrn1Q8K445 Gm15157-201ENSMUST00000121852 702 ntBASIC5.71□□□□□ -1.5
Clrn1Q8K445 Gm15038-201ENSMUST00000122144 296 ntBASIC5.71□□□□□ -1.5
Clrn1Q8K445 Gm12152-201ENSMUST00000122465 684 ntBASIC5.71□□□□□ -1.5
Clrn1Q8K445 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC5.71□□□□□ -1.5
Clrn1Q8K445 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Clrn1Q8K445 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC5.71□□□□□ -1.5
Clrn1Q8K445 Gm17154-201ENSMUST00000165748 431 ntBASIC5.71□□□□□ -1.5
Clrn1Q8K445 Gm24081-201ENSMUST00000175177 125 ntBASIC5.71□□□□□ -1.5
Clrn1Q8K445 n-R5s209-201ENSMUST00000179494 119 ntBASIC5.71□□□□□ -1.5
Clrn1Q8K445 Gm27998-201ENSMUST00000184902 361 ntBASIC5.71□□□□□ -1.5
Clrn1Q8K445 Gm27964-201ENSMUST00000185195 62 ntBASIC5.71□□□□□ -1.5
Clrn1Q8K445 Gm8367-201ENSMUST00000186145 887 ntBASIC5.71□□□□□ -1.5
Clrn1Q8K445 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Clrn1Q8K445 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Clrn1Q8K445 Gm28080-201ENSMUST00000188552 722 ntBASIC5.71□□□□□ -1.5
Clrn1Q8K445 Gm21715-201ENSMUST00000191056 694 ntBASIC5.71□□□□□ -1.5
Clrn1Q8K445 Gm28927-201ENSMUST00000191528 272 ntBASIC5.71□□□□□ -1.5
Clrn1Q8K445 Gm21006-201ENSMUST00000196930 667 ntBASIC5.71□□□□□ -1.5
Clrn1Q8K445 Gm43431-201ENSMUST00000198577 340 ntBASIC5.71□□□□□ -1.5
Clrn1Q8K445 Gm31211-201ENSMUST00000199170 253 ntBASIC5.71□□□□□ -1.5
Clrn1Q8K445 Gm43384-201ENSMUST00000200569 637 ntBASIC5.71□□□□□ -1.5
Clrn1Q8K445 Gm17893-201ENSMUST00000203017 770 ntBASIC5.71□□□□□ -1.5
Clrn1Q8K445 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC5.71□□□□□ -1.5
Clrn1Q8K445 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC5.71□□□□□ -1.5
Clrn1Q8K445 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC5.71□□□□□ -1.5
Clrn1Q8K445 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC5.71□□□□□ -1.5
Clrn1Q8K445 AC156952.1-201ENSMUST00000220361 793 ntBASIC5.71□□□□□ -1.5
Clrn1Q8K445 AC140930.1-201ENSMUST00000221889 389 ntBASIC5.71□□□□□ -1.5
Clrn1Q8K445 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Clrn1Q8K445 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC5.71□□□□□ -1.5
Clrn1Q8K445 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms