Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Gm37525-201ENSMUST00000193499 2871 ntBASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 AC140299.2-201ENSMUST00000219546 1969 ntBASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Gm42885-201ENSMUST00000200763 4214 ntBASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Gm3555-201ENSMUST00000160287 1395 ntBASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Gm43557-201ENSMUST00000197100 2370 ntBASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC7.47□□□□□ -1.21
Trim47Q8C0E3 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Gm18878-201ENSMUST00000223071 1443 ntBASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Gm45112-201ENSMUST00000208576 5125 ntBASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Gm9226-201ENSMUST00000188352 3489 ntBASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Gm14885-201ENSMUST00000117969 496 ntBASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Gm12135-201ENSMUST00000119170 466 ntBASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Gm11484-201ENSMUST00000119808 338 ntBASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Gm14927-201ENSMUST00000120283 454 ntBASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Gm4202-201ENSMUST00000169025 733 ntBASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Gm6155-201ENSMUST00000173735 341 ntBASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Gm27044-201ENSMUST00000183033 796 ntBASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Mir6244-201ENSMUST00000184156 117 ntBASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Gm37191-201ENSMUST00000193346 388 ntBASIC7.47□□□□□ -1.21
Trim47Q8C0E3 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Gm43459-201ENSMUST00000202093 331 ntBASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Gm44254-201ENSMUST00000204184 322 ntBASIC7.47□□□□□ -1.21
Trim47Q8C0E3 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Trim47Q8C0E3 AC148328.2-201ENSMUST00000216960 262 ntBASIC7.47□□□□□ -1.21
Trim47Q8C0E3 AC140930.4-201ENSMUST00000220750 150 ntBASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Gm7753-201ENSMUST00000221007 867 ntBASIC7.47□□□□□ -1.21
Trim47Q8C0E3 AC174082.1-201ENSMUST00000221106 307 ntBASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Gm7986-201ENSMUST00000221336 551 ntBASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Gm46994-201ENSMUST00000221523 219 ntBASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Gm6575-201ENSMUST00000222946 697 ntBASIC7.47□□□□□ -1.21
Trim47Q8C0E3 AC107663.1-201ENSMUST00000224257 468 ntBASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Gm23678-201ENSMUST00000083157 107 ntBASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Gm23461-201ENSMUST00000083265 107 ntBASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Gm24917-201ENSMUST00000083935 104 ntBASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Gm10727-201ENSMUST00000197107 1602 ntBASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Gm44102-201ENSMUST00000204031 1666 ntBASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Gm4973-201ENSMUST00000206925 1334 ntBASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Trim47Q8C0E3 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Trim47Q8C0E3 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Trim47Q8C0E3 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC7.46□□□□□ -1.21
Trim47Q8C0E3 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
Trim47Q8C0E3 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC7.46□□□□□ -1.21
Trim47Q8C0E3 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Trim47Q8C0E3 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Trim47Q8C0E3 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Trim47Q8C0E3 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Trim47Q8C0E3 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.21
Trim47Q8C0E3 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC7.46□□□□□ -1.21
Trim47Q8C0E3 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Trim47Q8C0E3 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC7.46□□□□□ -1.21
Trim47Q8C0E3 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Trim47Q8C0E3 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC7.46□□□□□ -1.22
Trim47Q8C0E3 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
Trim47Q8C0E3 Mir759-201ENSMUST00000103254 98 ntBASIC7.46□□□□□ -1.22
Trim47Q8C0E3 Gm12842-201ENSMUST00000117298 476 ntBASIC7.46□□□□□ -1.22
Trim47Q8C0E3 Gm12653-201ENSMUST00000117778 561 ntBASIC7.46□□□□□ -1.22
Trim47Q8C0E3 Gm15399-201ENSMUST00000118055 724 ntBASIC7.46□□□□□ -1.22
Trim47Q8C0E3 Gm15312-201ENSMUST00000118827 271 ntBASIC7.46□□□□□ -1.22
Trim47Q8C0E3 Gm12222-201ENSMUST00000121368 260 ntBASIC7.46□□□□□ -1.22
Trim47Q8C0E3 Gm15309-201ENSMUST00000121644 240 ntBASIC7.46□□□□□ -1.22
Trim47Q8C0E3 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Trim47Q8C0E3 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC7.46□□□□□ -1.22
Trim47Q8C0E3 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Trim47Q8C0E3 Gm22311-201ENSMUST00000158006 110 ntBASIC7.46□□□□□ -1.22
Trim47Q8C0E3 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Trim47Q8C0E3 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC7.46□□□□□ -1.22
Trim47Q8C0E3 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC7.46□□□□□ -1.22
Trim47Q8C0E3 Gm28116-201ENSMUST00000189064 387 ntBASIC7.46□□□□□ -1.22
Trim47Q8C0E3 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC7.46□□□□□ -1.22
Trim47Q8C0E3 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Trim47Q8C0E3 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC7.46□□□□□ -1.22
Trim47Q8C0E3 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC7.46□□□□□ -1.22
Trim47Q8C0E3 Gm36998-201ENSMUST00000193205 704 ntBASIC7.46□□□□□ -1.22
Trim47Q8C0E3 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC7.46□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms