Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm15357-201ENSMUST00000119160 285 ntBASIC7.38□□□□□ -1.23
Usp47Q8BY87 Gm24685-201ENSMUST00000157764 285 ntBASIC7.38□□□□□ -1.23
Usp47Q8BY87 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Usp47Q8BY87 Esd-ps-201ENSMUST00000170684 847 ntBASIC7.38□□□□□ -1.23
Usp47Q8BY87 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Usp47Q8BY87 Gm27688-201ENSMUST00000183634 91 ntBASIC7.38□□□□□ -1.23
Usp47Q8BY87 Gm44307-201ENSMUST00000204466 764 ntBASIC7.38□□□□□ -1.23
Usp47Q8BY87 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC7.38□□□□□ -1.23
Usp47Q8BY87 AC152169.2-201ENSMUST00000224558 613 ntBASIC7.38□□□□□ -1.23
Usp47Q8BY87 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Usp47Q8BY87 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Usp47Q8BY87 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
Usp47Q8BY87 Gm25260-201ENSMUST00000083053 134 ntBASIC7.38□□□□□ -1.23
Usp47Q8BY87 Snora30-201ENSMUST00000083325 130 ntBASIC7.38□□□□□ -1.23
Usp47Q8BY87 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Usp47Q8BY87 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Usp47Q8BY87 Gm17791-201ENSMUST00000185660 1501 ntBASIC7.38□□□□□ -1.23
Usp47Q8BY87 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Usp47Q8BY87 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC7.38□□□□□ -1.23
Usp47Q8BY87 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Usp47Q8BY87 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Usp47Q8BY87 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Usp47Q8BY87 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Usp47Q8BY87 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Usp47Q8BY87 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Usp47Q8BY87 Gm22272-201ENSMUST00000104039 134 ntBASIC7.37□□□□□ -1.23
Usp47Q8BY87 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC7.37□□□□□ -1.23
Usp47Q8BY87 Gm14086-201ENSMUST00000117152 173 ntBASIC7.37□□□□□ -1.23
Usp47Q8BY87 Gm15828-201ENSMUST00000119911 522 ntBASIC7.37□□□□□ -1.23
Usp47Q8BY87 Gm45731-201ENSMUST00000211988 1203 ntBASIC7.37□□□□□ -1.23
Usp47Q8BY87 AC116724.1-201ENSMUST00000227900 972 ntBASIC7.37□□□□□ -1.23
Usp47Q8BY87 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Usp47Q8BY87 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Usp47Q8BY87 Mir342-201ENSMUST00000083502 99 ntBASIC7.37□□□□□ -1.23
Usp47Q8BY87 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC7.37□□□□□ -1.23
Usp47Q8BY87 Gm43283-201ENSMUST00000199138 2548 ntBASIC7.37□□□□□ -1.23
Usp47Q8BY87 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC7.37□□□□□ -1.23
Usp47Q8BY87 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Usp47Q8BY87 Gm36963-201ENSMUST00000193506 2324 ntBASIC7.37□□□□□ -1.23
Usp47Q8BY87 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Usp47Q8BY87 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Usp47Q8BY87 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC7.37□□□□□ -1.23
Usp47Q8BY87 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Usp47Q8BY87 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Usp47Q8BY87 AC158938.1-201ENSMUST00000225372 6720 ntBASIC7.36□□□□□ -1.23
Usp47Q8BY87 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC7.36□□□□□ -1.23
Usp47Q8BY87 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Usp47Q8BY87 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Usp47Q8BY87 Gm10087-201ENSMUST00000167650 330 ntBASIC7.36□□□□□ -1.23
Usp47Q8BY87 Gm9499-201ENSMUST00000180888 964 ntBASIC7.36□□□□□ -1.23
Usp47Q8BY87 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Usp47Q8BY87 Gm38011-201ENSMUST00000193312 279 ntBASIC7.36□□□□□ -1.23
Usp47Q8BY87 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC7.36□□□□□ -1.23
Usp47Q8BY87 AC121599.1-201ENSMUST00000224276 449 ntBASIC7.36□□□□□ -1.23
Usp47Q8BY87 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
Usp47Q8BY87 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Usp47Q8BY87 Gm44439-201ENSMUST00000203379 3592 ntBASIC7.36□□□□□ -1.23
Usp47Q8BY87 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC7.36□□□□□ -1.23
Usp47Q8BY87 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Usp47Q8BY87 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Usp47Q8BY87 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Usp47Q8BY87 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Usp47Q8BY87 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Usp47Q8BY87 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Usp47Q8BY87 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Usp47Q8BY87 Gm29084-201ENSMUST00000185587 1452 ntBASIC7.36□□□□□ -1.23
Usp47Q8BY87 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Usp47Q8BY87 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Usp47Q8BY87 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Usp47Q8BY87 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Usp47Q8BY87 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Usp47Q8BY87 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Usp47Q8BY87 Gm26300-201ENSMUST00000102282 94 ntBASIC7.35□□□□□ -1.23
Usp47Q8BY87 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC7.35□□□□□ -1.23
Usp47Q8BY87 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC7.35□□□□□ -1.23
Usp47Q8BY87 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Usp47Q8BY87 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Usp47Q8BY87 Ighv6-2-201ENSMUST00000192430 295 ntBASIC7.35□□□□□ -1.23
Usp47Q8BY87 Mir30b-201ENSMUST00000083542 96 ntBASIC7.35□□□□□ -1.23
Usp47Q8BY87 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Usp47Q8BY87 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Usp47Q8BY87 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC7.35□□□□□ -1.23
Usp47Q8BY87 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC7.35□□□□□ -1.23
Usp47Q8BY87 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Usp47Q8BY87 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Usp47Q8BY87 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC7.35□□□□□ -1.23
Usp47Q8BY87 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Usp47Q8BY87 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Usp47Q8BY87 AC122355.1-201ENSMUST00000228155 4184 ntBASIC7.35□□□□□ -1.23
Usp47Q8BY87 Gm37717-201ENSMUST00000192647 3027 ntBASIC7.35□□□□□ -1.23
Usp47Q8BY87 Gm42503-201ENSMUST00000199080 3706 ntBASIC7.35□□□□□ -1.23
Usp47Q8BY87 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC7.35□□□□□ -1.23
Usp47Q8BY87 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Usp47Q8BY87 AC159896.3-201ENSMUST00000215904 3835 ntBASIC7.35□□□□□ -1.23
Usp47Q8BY87 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Usp47Q8BY87 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Usp47Q8BY87 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Usp47Q8BY87 Gm11486-201ENSMUST00000107322 478 ntBASIC7.34□□□□□ -1.23
Usp47Q8BY87 Gm15560-201ENSMUST00000117107 643 ntBASIC7.34□□□□□ -1.23
Usp47Q8BY87 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms