Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm11894-201ENSMUST00000121579 328 ntBASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Gm7438-201ENSMUST00000177664 639 ntBASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Gm7408-201ENSMUST00000178014 639 ntBASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Gm7386-201ENSMUST00000178020 639 ntBASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Gm3657-201ENSMUST00000178170 639 ntBASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Gm7415-201ENSMUST00000178205 639 ntBASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Gm7398-201ENSMUST00000178589 639 ntBASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Gm7391-201ENSMUST00000178680 639 ntBASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Gm7375-201ENSMUST00000179232 639 ntBASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Gm3681-201ENSMUST00000179940 639 ntBASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Gm27468-201ENSMUST00000183577 106 ntBASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Gm28503-201ENSMUST00000185966 147 ntBASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Igkv15-101-201ENSMUST00000195917 299 ntBASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Gm43556-201ENSMUST00000196186 681 ntBASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Gm43724-201ENSMUST00000197516 226 ntBASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC7.74□□□□□ -1.17
Usp40Q8BWR4 AC151971.3-201ENSMUST00000214694 404 ntBASIC7.74□□□□□ -1.17
Usp40Q8BWR4 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC7.74□□□□□ -1.17
Usp40Q8BWR4 AC238676.3-201ENSMUST00000223042 154 ntBASIC7.74□□□□□ -1.17
Usp40Q8BWR4 AC160980.2-201ENSMUST00000225131 949 ntBASIC7.74□□□□□ -1.17
Usp40Q8BWR4 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Usp40Q8BWR4 AC160120.1-201ENSMUST00000227446 663 ntBASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Usp40Q8BWR4 n-R5s65-201ENSMUST00000082614 117 ntBASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC7.74□□□□□ -1.17
Usp40Q8BWR4 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Usp40Q8BWR4 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC7.74□□□□□ -1.17
Usp40Q8BWR4 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Gm45520-201ENSMUST00000210109 2031 ntBASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Usp40Q8BWR4 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Gm15152-201ENSMUST00000121540 394 ntBASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Gm4831-201ENSMUST00000174626 594 ntBASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Gm23872-201ENSMUST00000175432 77 ntBASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Gm21045-201ENSMUST00000183058 1020 ntBASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Gm18303-201ENSMUST00000190055 1176 ntBASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Gm38330-201ENSMUST00000192743 959 ntBASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Gm37088-201ENSMUST00000193887 406 ntBASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Gm44108-201ENSMUST00000203525 422 ntBASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Gm5339-201ENSMUST00000210551 1102 ntBASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Gm18414-201ENSMUST00000210858 694 ntBASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
Usp40Q8BWR4 AC116589.3-202ENSMUST00000221770 649 ntBASIC7.73□□□□□ -1.17
Usp40Q8BWR4 AC116589.6-201ENSMUST00000222252 649 ntBASIC7.73□□□□□ -1.17
Usp40Q8BWR4 AC165347.1-201ENSMUST00000224089 1025 ntBASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Nsa2-203ENSMUST00000225410 974 ntBASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Gm44723-201ENSMUST00000207369 4000 ntBASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Gm43842-201ENSMUST00000202890 2982 ntBASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Usp40Q8BWR4 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC7.72□□□□□ -1.17
Usp40Q8BWR4 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Usp40Q8BWR4 Gm13590-201ENSMUST00000120183 1588 ntBASIC7.72□□□□□ -1.17
Usp40Q8BWR4 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp40Q8BWR4 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp40Q8BWR4 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp40Q8BWR4 Gm37621-201ENSMUST00000194716 5531 ntBASIC7.72□□□□□ -1.17
Usp40Q8BWR4 Gm18853-201ENSMUST00000183629 3596 ntBASIC7.72□□□□□ -1.17
Usp40Q8BWR4 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Usp40Q8BWR4 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Usp40Q8BWR4 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Usp40Q8BWR4 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Usp40Q8BWR4 Gm11987-201ENSMUST00000118524 381 ntBASIC7.72□□□□□ -1.17
Usp40Q8BWR4 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Usp40Q8BWR4 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Usp40Q8BWR4 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC7.72□□□□□ -1.17
Usp40Q8BWR4 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC7.72□□□□□ -1.17
Usp40Q8BWR4 Gm22529-201ENSMUST00000158817 123 ntBASIC7.72□□□□□ -1.17
Usp40Q8BWR4 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Usp40Q8BWR4 Gm4832-201ENSMUST00000182679 399 ntBASIC7.72□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms