Protein–RNA interactions for Protein: Q6KCD5

Nipbl, Nipped-B-like protein, mousemouse

Known RBP Predictions only

Length 2,798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NipblQ6KCD5 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NipblQ6KCD5 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NipblQ6KCD5 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
NipblQ6KCD5 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NipblQ6KCD5 Gm22750-201ENSMUST00000102076 103 ntBASIC4.11□□□□□ -1.75
NipblQ6KCD5 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
NipblQ6KCD5 Gm15333-201ENSMUST00000118825 364 ntBASIC4.11□□□□□ -1.75
NipblQ6KCD5 Gm15263-201ENSMUST00000121556 642 ntBASIC4.11□□□□□ -1.75
NipblQ6KCD5 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NipblQ6KCD5 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC4.11□□□□□ -1.75
NipblQ6KCD5 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NipblQ6KCD5 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NipblQ6KCD5 Gm26167-201ENSMUST00000158423 253 ntBASIC4.11□□□□□ -1.75
NipblQ6KCD5 Gm18128-201ENSMUST00000172625 511 ntBASIC4.11□□□□□ -1.75
NipblQ6KCD5 Gm7634-201ENSMUST00000185778 553 ntBASIC4.11□□□□□ -1.75
NipblQ6KCD5 Gm10292-202ENSMUST00000193165 585 ntBASIC4.11□□□□□ -1.75
NipblQ6KCD5 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NipblQ6KCD5 Gm32308-201ENSMUST00000203053 280 ntBASIC4.11□□□□□ -1.75
NipblQ6KCD5 Olfr1309-201ENSMUST00000207885 964 ntBASIC4.11□□□□□ -1.75
NipblQ6KCD5 AC155266.1-201ENSMUST00000220762 904 ntBASIC4.11□□□□□ -1.75
NipblQ6KCD5 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC4.11□□□□□ -1.75
NipblQ6KCD5 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NipblQ6KCD5 Gm43121-201ENSMUST00000199065 1305 ntBASIC4.11□□□□□ -1.75
NipblQ6KCD5 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NipblQ6KCD5 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC4.11□□□□□ -1.75
NipblQ6KCD5 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC4.11□□□□□ -1.75
NipblQ6KCD5 AC139350.2-201ENSMUST00000226508 2331 ntBASIC4.11□□□□□ -1.75
NipblQ6KCD5 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NipblQ6KCD5 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NipblQ6KCD5 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NipblQ6KCD5 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NipblQ6KCD5 Gm23692-201ENSMUST00000101881 160 ntBASIC4.11□□□□□ -1.75
NipblQ6KCD5 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
NipblQ6KCD5 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
NipblQ6KCD5 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC4.11□□□□□ -1.75
NipblQ6KCD5 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NipblQ6KCD5 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC4.11□□□□□ -1.75
NipblQ6KCD5 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC4.11□□□□□ -1.75
NipblQ6KCD5 Gm7946-201ENSMUST00000203326 958 ntBASIC4.11□□□□□ -1.75
NipblQ6KCD5 AC140785.1-201ENSMUST00000217782 383 ntBASIC4.11□□□□□ -1.75
NipblQ6KCD5 Gm6906-201ENSMUST00000218014 569 ntBASIC4.11□□□□□ -1.75
NipblQ6KCD5 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NipblQ6KCD5 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NipblQ6KCD5 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NipblQ6KCD5 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
NipblQ6KCD5 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
NipblQ6KCD5 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
NipblQ6KCD5 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC4.11□□□□□ -1.75
NipblQ6KCD5 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NipblQ6KCD5 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
NipblQ6KCD5 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC4.11□□□□□ -1.75
NipblQ6KCD5 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
NipblQ6KCD5 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
NipblQ6KCD5 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NipblQ6KCD5 Gm38362-201ENSMUST00000192999 2064 ntBASIC4.1□□□□□ -1.75
NipblQ6KCD5 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NipblQ6KCD5 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
NipblQ6KCD5 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC4.1□□□□□ -1.75
NipblQ6KCD5 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC4.1□□□□□ -1.75
NipblQ6KCD5 Gm22819-201ENSMUST00000157445 303 ntBASIC4.1□□□□□ -1.75
NipblQ6KCD5 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
NipblQ6KCD5 Gm27148-201ENSMUST00000185086 160 ntBASIC4.1□□□□□ -1.75
NipblQ6KCD5 Gm9038-201ENSMUST00000203400 604 ntBASIC4.1□□□□□ -1.75
NipblQ6KCD5 Gm44074-201ENSMUST00000204562 337 ntBASIC4.1□□□□□ -1.75
NipblQ6KCD5 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NipblQ6KCD5 Gm6362-201ENSMUST00000217686 836 ntBASIC4.1□□□□□ -1.75
NipblQ6KCD5 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC4.1□□□□□ -1.75
NipblQ6KCD5 AC154198.1-201ENSMUST00000222839 424 ntBASIC4.1□□□□□ -1.75
NipblQ6KCD5 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NipblQ6KCD5 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NipblQ6KCD5 Gm18066-201ENSMUST00000210904 1774 ntBASIC4.1□□□□□ -1.75
NipblQ6KCD5 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
NipblQ6KCD5 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
NipblQ6KCD5 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC4.1□□□□□ -1.75
NipblQ6KCD5 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
NipblQ6KCD5 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC4.1□□□□□ -1.75
NipblQ6KCD5 Gm37593-201ENSMUST00000191669 3254 ntBASIC4.1□□□□□ -1.75
NipblQ6KCD5 AC164567.3-201ENSMUST00000217743 2869 ntBASIC4.1□□□□□ -1.75
NipblQ6KCD5 Gm37967-201ENSMUST00000195634 2665 ntBASIC4.1□□□□□ -1.75
NipblQ6KCD5 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NipblQ6KCD5 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.1□□□□□ -1.75
NipblQ6KCD5 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NipblQ6KCD5 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
NipblQ6KCD5 Gm16394-201ENSMUST00000117289 675 ntBASIC4.1□□□□□ -1.75
NipblQ6KCD5 Scarna10-201ENSMUST00000158992 325 ntBASIC4.1□□□□□ -1.75
NipblQ6KCD5 Gm36382-201ENSMUST00000198892 541 ntBASIC4.1□□□□□ -1.75
NipblQ6KCD5 Gm44243-201ENSMUST00000204323 692 ntBASIC4.1□□□□□ -1.75
NipblQ6KCD5 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC4.1□□□□□ -1.75
NipblQ6KCD5 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NipblQ6KCD5 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NipblQ6KCD5 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NipblQ6KCD5 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC4.1□□□□□ -1.75
NipblQ6KCD5 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NipblQ6KCD5 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
NipblQ6KCD5 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
NipblQ6KCD5 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NipblQ6KCD5 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC4.1□□□□□ -1.75
NipblQ6KCD5 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC4.09□□□□□ -1.75
NipblQ6KCD5 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
NipblQ6KCD5 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms