Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Sh3rf1Q69ZI1 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Sh3rf1Q69ZI1 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sh3rf1Q69ZI1 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sh3rf1Q69ZI1 Gm43328-201ENSMUST00000198544 1434 ntBASIC6.55□□□□□ -1.36
Sh3rf1Q69ZI1 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sh3rf1Q69ZI1 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sh3rf1Q69ZI1 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Sh3rf1Q69ZI1 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sh3rf1Q69ZI1 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC6.55□□□□□ -1.36
Sh3rf1Q69ZI1 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
Sh3rf1Q69ZI1 Gm44676-201ENSMUST00000208520 3055 ntBASIC6.55□□□□□ -1.36
Sh3rf1Q69ZI1 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sh3rf1Q69ZI1 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Sh3rf1Q69ZI1 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Sh3rf1Q69ZI1 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC6.55□□□□□ -1.36
Sh3rf1Q69ZI1 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Sh3rf1Q69ZI1 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Sh3rf1Q69ZI1 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm43128-201ENSMUST00000202212 1621 ntBASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 AC158938.1-201ENSMUST00000225372 6720 ntBASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Zfp640-202ENSMUST00000224116 1562 ntBASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm12520-201ENSMUST00000117493 316 ntBASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm15021-201ENSMUST00000117832 742 ntBASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm4992-201ENSMUST00000120256 768 ntBASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 M6pr-ps-201ENSMUST00000120481 830 ntBASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm13743-201ENSMUST00000121486 724 ntBASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm15388-201ENSMUST00000121578 726 ntBASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm22199-201ENSMUST00000122660 126 ntBASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm22452-201ENSMUST00000122804 104 ntBASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm15534-201ENSMUST00000137642 562 ntBASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm24225-201ENSMUST00000158825 98 ntBASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm24176-201ENSMUST00000158928 121 ntBASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm20454-201ENSMUST00000172713 221 ntBASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm4076-201ENSMUST00000179230 965 ntBASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm27013-201ENSMUST00000182441 1024 ntBASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm27762-201ENSMUST00000183417 109 ntBASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm29160-201ENSMUST00000190094 699 ntBASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm37209-201ENSMUST00000194109 1276 ntBASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Igkv4-83-201ENSMUST00000196933 334 ntBASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm43228-201ENSMUST00000200735 264 ntBASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm43459-201ENSMUST00000202093 331 ntBASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm3565-201ENSMUST00000222670 609 ntBASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 AC140209.1-204ENSMUST00000226736 739 ntBASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm25403-201ENSMUST00000082971 143 ntBASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm37106-201ENSMUST00000193760 1532 ntBASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Sh3rf1Q69ZI1 Gm43031-201ENSMUST00000198500 1887 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Gm37595-201ENSMUST00000192668 1742 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 AC154511.1-201ENSMUST00000222578 1587 ntBASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sh3rf1Q69ZI1 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms